[gmx-users] trr visualization
spoel at xray.bmc.uu.se
Thu Nov 11 23:43:27 CET 2004
On Thu, 2004-11-11 at 14:22 -0800, Cesar Lopez wrote:
> Hi anybody:
> I have some problems with .trr files
> visualizations,nowadays I have the VMD package
> installed in my pc, when I try to load a trr file, the
> software load the file, but indeed I can't see
> anything in the screen. I tried to use the VEGA
> package to see the .xtc file generated by Gromacs, but
> the software can't open it !
In VMD you first load a pdb file then a trr or xtc file.
> There is only a way to see the file and is with the
> comand ngmx, but the resolution is not good and it
> can't write pdb files.
> Can anybody help me with it?
> Thank you very much
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David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://xray.bmc.uu.se/~spoel
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