[gmx-users] Parallel run error

[M.Naser]

Hi Anton,

Sorry for the delayed response. Yes, it runs on single node but it still
crashing and I get md.log file.It normally crashes between 7000 - 70000
steps.

with regards,

Abu


> M.Naser wrote:
>
>> Hi Itamar !
>>
>> Thanks for your response. It is still crashing.
>>
>> Please give me some hint about likley problems.
>
> With the little info you gave till now, it's still guessing...!
>
> As David asked, can you run it on a single CPU?
>
> Did it even start (e.g. did you get the usual gromacs intro message
> printed on screen)?
>
> Did you get any output from mdrun at all (e.g., md0.log)?
>
> If so, how far along did you simulation (or minimization) get?
> No steps, a few steps, a few ps, a few ns?
>
>
> --
> Groetjes,
>
> Anton
>   _____________ _______________________________________________________
> |             |                                                       |
> |  _   _  ___,| K. Anton Feenstra                                     |
> | / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
> |(   |   )| | | De Boelelaan 1083 - 1081 HV Amsterdam - Netherlands   |
> | \_/ \_/ | | | Tel: +31 20 44 47608 - Fax: +31 20 44 47610           |
> |             | Feenstra at few.vu.nl - www.few.vu.nl/~feenstra/         |
> |             | "If You See Me Getting High, Knock Me Down" (RHCP)    |
> |_____________|_______________________________________________________|
>
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