[gmx-users] gromacs on mac osx

[Yunfeng Hu]

You are right. When I type the full path, it seems working. I thought 
that I have proper links by using 'make links'. Then how do you make 
sure that you do not need to type the full path every time. I try to 
set the full path in the .cshrc and it still shows the same error as 
before. Thanks.

Eric
On Sep 21, 2004, at 6:16 PM, Choon Peng wrote:

> Hi Eric,
>
>   I mean try using the full path, say:
> /usr/local/gromacs/powerpc-apple-darwin7.0.0/bin/grompp
>
> However, what I have on my laptop is the 3.1.5_pre1 version. Having 
> problems
> compiling 3.2.1 on my PowerBook but ok on our PowerMac G5...
> Guess I'll have to try again.
>
> cheers,
> Choon Peng
>
> On 9/22/04 8:59 AM, "Yunfeng Hu" <yunfeng at scripps.edu> wrote:
>
>> Can you specify what you mean? I am compiling it on a G4 ibook. 
>> Thanks.
>>
>> Eric
>> On Sep 21, 2004, at 5:35 PM, Choon Peng wrote:
>>
>>> Hi Eric,
>>>
>>>   Can you try using the full path to the grompp and mdrun?
>>>
>>> cheers,
>>> Choon Peng
>>> PS: I have Gromacs on my G4 laptop and our G5 cluster.
>>> -- 
>>> Mr Choon-Peng Chng
>>> Research Associate
>>> Computational Biology Group
>>> Bioinformatics Institute, A*STAR
>>> 30 Biopolis Street, Level 7. Singapore 138671.
>>> DID: +65 6478 8301 FAX: +65 6478 9047
>>> WWW: http://www.bii.a-star.edu.sg/~cpchng
>>>
>>> On 9/22/04 7:24 AM, "Yunfeng Hu" <yunfeng at scripps.edu> wrote:
>>>
>>>> Hi, I compiled fftw and gromacs 3.2 on mac osx without error. 
>>>> However
>>>> I
>>>> get segmentation errors when I run the tutorials. Does anyone have
>>>> similar experiences? Thanks.
>>>>
>>>> Eric Hu, Ph.D.
>>>>
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