[gmx-users] mpi error
David
spoel at xray.bmc.uu.se
Sat Apr 30 09:55:50 CEST 2005
On Sat, 2005-04-30 at 15:44 +0800, Mu Yuguang (Dr) wrote:
> Hi David,
> It's sparc.
Please try installing LAM and FFTW yourself then, should work out of the
box.
>
> Dr. Yuguang Mu
> Division of Computational and Structural Biology
> School of Biological Sciences
> Nanyang Technological University,
>
> 60 Nanyang Drive
> Singapore 637551
> Tel: 0065-63162885
> Mail: ygmu at ntu.edu.sg
>
> > -----Original Message-----
> > From: gmx-users-bounces at gromacs.org
> [mailto:gmx-users-bounces at gromacs.org]
> > On Behalf Of David
> > Sent: Saturday, April 30, 2005 2:52 PM
> > To: Discussion list for GROMACS users
> > Subject: Re: [gmx-users] mpi error
> >
> > On Sat, 2005-04-30 at 09:37 +0800, Mu Yuguang (Dr) wrote:
> > > Dear all,
> > > I have compiled in mpi version (seems ok). But when run it, it has
> such
> > > error message:
> > >
> > > [unknown MPI_COMM_WORLD unknown] ERROR in MPI_Init: unclassified
> error:
> > > RTE_Init_lib: GetEnvAout::getenv(RANK): Internal error
> > > Fatal error, aborting.
> > >
> > > Could you help me pin down the reason.
> > > It is on a sun 32cpus machine.
> >
> > which MPI version is that? Is this on sparc hardware or something
> else?
> >
> > May you can try to install the LAM library instead.
> >
> > > _______________________________________________
> > > gmx-users mailing list
> > > gmx-users at gromacs.org
> > > http://www.gromacs.org/mailman/listinfo/gmx-users
> > > Please don't post (un)subscribe requests to the list. Use the
> > > www interface or send it to gmx-users-request at gromacs.org.
> > --
> > David.
> >
> ________________________________________________________________________
> > David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
> > Dept. of Cell and Molecular Biology, Uppsala University.
> > Husargatan 3, Box 596, 75124 Uppsala, Sweden
> > phone: 46 18 471 4205 fax: 46 18 511 755
> > spoel at xray.bmc.uu.se spoel at gromacs.org
> http://xray.bmc.uu.se/~spoel
> >
> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> >
> > _______________________________________________
> > gmx-users mailing list
> > gmx-users at gromacs.org
> > http://www.gromacs.org/mailman/listinfo/gmx-users
> > Please don't post (un)subscribe requests to the list. Use the
> > www interface or send it to gmx-users-request at gromacs.org.
> _______________________________________________
> gmx-users mailing list
> gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://xray.bmc.uu.se/~spoel
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
More information about the gromacs.org_gmx-users
mailing list