[gmx-users] mpi error

Mu Yuguang (Dr) YGMu at ntu.edu.sg
Sat Apr 30 09:59:29 CEST 2005


I am trying now.
Thanks

Dr. Yuguang Mu
Division of Computational and Structural Biology
School of Biological Sciences
Nanyang Technological University
60 Nanyang Drive
Singapore 637551
Tel: 0065-63162885
Mail: ygmu at ntu.edu.sg

> -----Original Message-----
> From: gmx-users-bounces at gromacs.org
[mailto:gmx-users-bounces at gromacs.org]
> On Behalf Of David
> Sent: Saturday, April 30, 2005 3:56 PM
> To: Discussion list for GROMACS users
> Subject: RE: [gmx-users] mpi error
> 
> On Sat, 2005-04-30 at 15:44 +0800, Mu Yuguang (Dr) wrote:
> > Hi David,
> > It's sparc.
> Please try installing LAM and FFTW yourself then, should work out of
the
> box.
> 
> >
> > Dr. Yuguang Mu
> > Division of Computational and Structural Biology
> > School of Biological Sciences
> > Nanyang Technological University,
> >
> > 60 Nanyang Drive
> > Singapore 637551
> > Tel: 0065-63162885
> > Mail: ygmu at ntu.edu.sg
> >
> > > -----Original Message-----
> > > From: gmx-users-bounces at gromacs.org
> > [mailto:gmx-users-bounces at gromacs.org]
> > > On Behalf Of David
> > > Sent: Saturday, April 30, 2005 2:52 PM
> > > To: Discussion list for GROMACS users
> > > Subject: Re: [gmx-users] mpi error
> > >
> > > On Sat, 2005-04-30 at 09:37 +0800, Mu Yuguang (Dr) wrote:
> > > > Dear all,
> > > > I have compiled in mpi version (seems ok). But when run it, it
has
> > such
> > > > error message:
> > > >
> > > > [unknown MPI_COMM_WORLD unknown] ERROR in MPI_Init: unclassified
> > error:
> > > > RTE_Init_lib: GetEnvAout::getenv(RANK): Internal error
> > > > Fatal error, aborting.
> > > >
> > > > Could you help me pin down the reason.
> > > > It is on a sun 32cpus machine.
> > >
> > > which MPI version is that? Is this on sparc hardware or something
> > else?
> > >
> > > May you can try to install the LAM library instead.
> > >
> > > > _______________________________________________
> > > > gmx-users mailing list
> > > > gmx-users at gromacs.org
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> > > --
> > > David.
> > >
> >
________________________________________________________________________
> > > David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics
group,
> > > Dept. of Cell and Molecular Biology, Uppsala University.
> > > Husargatan 3, Box 596,          75124 Uppsala, Sweden
> > > phone:  46 18 471 4205          fax: 46 18 511 755
> > > spoel at xray.bmc.uu.se    spoel at gromacs.org
> > http://xray.bmc.uu.se/~spoel
> > >
> >
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> > >
> > > _______________________________________________
> > > gmx-users mailing list
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> > > Please don't post (un)subscribe requests to the list. Use the
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> > _______________________________________________
> > gmx-users mailing list
> > gmx-users at gromacs.org
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> --
> David.
>
________________________________________________________________________
> David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
> Dept. of Cell and Molecular Biology, Uppsala University.
> Husargatan 3, Box 596,          75124 Uppsala, Sweden
> phone:  46 18 471 4205          fax: 46 18 511 755
> spoel at xray.bmc.uu.se    spoel at gromacs.org
http://xray.bmc.uu.se/~spoel
>
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> 
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