[gmx-users] Indx file making

[Itamar Kass]

  Shalom,

You can use make_ndx. Using this you can create a new group from the  
combination of other groups (e.g. "2 | 3" will combine groups 2 and  
3).  thane you can rename it and put it in your mdp file.

Cheers.


On Dec 27, 2005, at 2:42 PM, hnam wrote:

>
>
> In the name of God
> I have three group in my system ,Protein ,Sol, Na+ ,how can i  
> create these
> group at index file or how can i make proper index file for my system.
>
> Thank you very much in advance
> Institute of  Biochemistry  and  Biophysics (IBB)
> Tehran University
> P.O.box 1417614411
> Tehran
> Iran
>
>
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===========================================
| Itamar Kass
| The Alexander Silberman
| Institute of Life Sciences
| Department of Biological Chemistry
| The Hebrew University, Givat-Ram
| Jerusalem, 91904, Israel
| Tel: +972-(0)2-6585194
| Fax: +972-(0)2-6584329
| Email: ikass at cc.huji.ac.il
| Homepage: http://www.ls.huji.ac.il/~membranelab/itamar/ 
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