[gmx-users] gromacs 3.2.1 cygwin

javier sacristan jus29 at psu.edu
Tue Jul 19 22:11:13 CEST 2005

Hi, I am trying to install Gromacs-3.2.1 under CYGWIN with FFT 2.1.5, but
when I am doing make..... I get this error: (cannot find -lxml2)

Any idea??

Thank you very much

dlltool --as=as --dllname cygiconv-2.dll --def .libs/cygiconv-2.dll-def
--output-lib .libs/libimp-cygiconv-2.a
cc -O6 -fomit-frame-pointer -finline-functions -Wall -Wno-unused
-malign-double -funroll-all-loops -I/usr/include/libxml
2 -o grompp.exe topio.o toppush.o topcat.o topshake.o convparm.o tomorse.o
sorting.o splitter.o dum_parm.o readir.o add_
par.o topexcl.o toputil.o topdirs.o grompp.o  ../mdlib/.libs/libmd.a
-L/usr/X11R6/lib -L/opt/cxclient/usr/X11R6/lib -L/u
sr/lib ../gmxlib/.libs/libgmx.a /usr/lib/librfftw.a /usr/lib/libfftw.a
.libs/libimp-cygXm-2.a .libs/libimp-cygXft-2.a -l
Xrender .libs/libimp-cygfontconfig-1.a .libs/libimp-cygfreetype-6.a
.libs/libimp-cygexpat-0.a -lXt -lSM -lICE -lXext -lX
p -lX11 -lxml2 -lz .libs/libimp-cygiconv-2.a -Wl,--rpath -Wl,/usr/X11R6/lib
-Wl,--rpath -Wl,/usr/X11R6/lib
/usr/lib/gcc/i686-pc-cygwin/3.4.4/../../../../i686-pc-cygwin/bin/ld: cannot
find -lxml2

collect2: ld returned 1 exit status
make[3]: *** [grompp.exe] Error 1
make[3]: Leaving directory `/usr/local/gromacs-3.2.1/src/kernel'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory `/usr/local/gromacs-3.2.1/src'
make[1]: *** [all] Error 2
make[1]: Leaving directory `/usr/local/gromacs-3.2.1/src'
make: *** [all-recursive] Error 1

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