[gmx-users] equilibration & g_rdf

[Dallas B. Warren]

> a C* & ! a CL     (this is for g(r) C_CL, but what does the & a
> and ! mean?)

a = atom type
C* = all C atom types i.e. that starts with C and is followed by
anything else.
& = and
! = not, i.e. don't include the following atom types
CL = atom type CL

So that command will generate an index group that has a list of all the
carbon atoms.

Catch ya,

Dr. Dallas Warren
Lecturer
Department of Pharmaceutical Biology and Pharmacology
Victorian College of Pharmacy, Monash University
381 Royal Parade, Parkville VIC 3010
dallas.warren at vcp.monash.edu.au
+61 3 9903 9073
---------------------------------
When the only tool you own is a hammer, every problem begins to resemble
a nail.