[gmx-users] trjconv warning

[m-hatake at jaist.ac.jp]

Thank you for reply, Anton.

> The only cause for this I can think of is that you (temporarily) ran out 
> of diskspace (full disk or over quotum), causing output to the 
> trajectory to fail. Can you check if this may have happened?

I checked disk space, but disk space is enough to use(free space is over 50GB).
But,
after this simulation the machine had a something wrong and crashed.
so now I can't access the simulation data at all.
I guess the problem is not about Gromacs but the hardware, machine or disk or something.
So I'm trying the same simulation on other machine.
After that I will try the result data.

Thanks.

masa
Masaomi Hatakeyama
Dept. of Chemical Engineering
University of California, Davis (UCDavis)
tel: +1-530-754-9511(Laboratory)



From: Anton Feenstra <feenstra at few.vu.nl>
Subject: Re: [gmx-users] trjconv warning
Date: Thu, 23 Jun 2005 10:05:24 +0200

> m-hatake at jaist.ac.jp wrote:
> [...]
> > 'g_energy' works without problem until t=40,000[ps].
> 
> So your energy file is OK.
> 
> > I can get 'Total Energy' and other energy data, 
> > but the other commands, 'g_density' 'g_rotacf' and so on,
> >  using 'traj.trr' file stop at t=16120[ps].
> > 
> > Is it strange?
> > or 
> > this case is not improbable for some reason?
> 
> The only cause for this I can think of is that you (temporarily) ran out 
> of diskspace (full disk or over quotum), causing output to the 
> trajectory to fail. Can you check if this may have happened?
> 
> 
> -- 
> Groetjes,
> 
> Anton
> 
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