[gmx-users] The pdb2gmx conversion

[David van der Spoel]

On Fri, 2005-03-18 at 18:20 +0200, Vlad Scepanovsky wrote:
>    I've got a problem during the file conversion in Gromacs.
> The original file in PDB format was copied to the directory TOP in Gromacs.
> The whole path looks like that:
> C:\....\GROMACS\SHARE\TOP
this is not a good idea as you will mix the gromacs files with your data
files. you have to add the gromacs bin directory to your path and then
you can run the programs from anywhere.
> Would you be so glad to tell me the path for executable conversion by pdb2gmx.exe?
>                
> 
>                                                  Thank you for advice.
>                                                        Senserely yours Vladimir Schepanovsky.
> 
> 
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,          75124 Uppsala, Sweden
phone:  46 18 471 4205          fax: 46 18 511 755
spoel at xray.bmc.uu.se    spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,          75124 Uppsala, Sweden
phone:  46 18 471 4205          fax: 46 18 511 755
spoel at xray.bmc.uu.se    spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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