March 2005 Archives by subject
Starting: Tue Mar 1 00:42:06 CET 2005
Ending: Thu Mar 31 22:25:14 CEST 2005
Messages: 497
- [gmx-users] "Make Install" hold-up
Michael Clark
- [gmx-users] "Make Install" hold-up
Florian Haberl
- [gmx-users] "Make Install" hold-up
Erik Lindahl
- [gmx-users] "Segmentation fault" in mdrun
Monique Brito
- [gmx-users] "Segmentation fault" in mdrun
Haberl Florian
- [gmx-users] (no subject)
anna berteotti
- [gmx-users] (no subject)
masi at nmr.mpibpc.mpg.de
- [gmx-users] (no subject)
balamurugan r
- [gmx-users] (no subject)
T.A.Wassenaar
- [gmx-users] (no subject)
mn2 at hw.ac.uk
- [gmx-users] Re: +AFs-gmx-users+AF0- Fatal error: number of coordinate file +ADw-cm5+AF8-b4ion.gro, 28016+AD4- does not match
Marco Möller
- [gmx-users] Re: +AFs-gmx-users+AF0- libXm.so.1 Gromacs Help
Marco Möller
- [gmx-users] Re: Re: +AFs-gmx-users+AF0- twin-range cut-offs and OPLS
Marco Möller
- [gmx-users] -table option in mdrun
Yang Ye
- [gmx-users] -table option in mdrun
David van der Spoel
- [gmx-users] [ nonbonded_params ] and opls-aa
Paul Rowntree
- [gmx-users] [ nonbonded_params ] and opls-aa
Berk Hess
- [gmx-users] [Fwd: Following your advice to look for the database files...]
David van der Spoel
- [gmx-users] a install question
louyucun at seas.upenn.edu
- [gmx-users] a install question
David
- [gmx-users] a portal for MD
Alan Wilter Sousa da Silva
- [gmx-users] a portal for MD
David
- [gmx-users] a portal for MD
Anton Feenstra
- [gmx-users] A question about DNA and normal mode analysis in gromacs
Kristina Nicole Woods
- [gmx-users] acetonitrile
Anthony Cruz
- [gmx-users] acetonitrile
David van der Spoel
- [gmx-users] acetonitrile
Anthony Cruz
- [gmx-users] acetonitrile
David van der Spoel
- [gmx-users] Re: Active Site
Wei Fu
- [gmx-users] Re: Active Site
Wei Fu
- [gmx-users] Re: Active Site
Nancy Deng
- [gmx-users] Re: Active Site
Nuno R. L. Ferreira
- [gmx-users] Adding ion to equilibrated system using genion...
Binbin Liu
- [gmx-users] Adding ion to equilibrated system using genion...
David
- [gmx-users] Re: Adding ion to equilibrated system using genion...
Binbin Liu
- [gmx-users] Re: Adding ion to equilibrated system using genion...
Dallas Warren
- [gmx-users] Re: Adding ion to equilibrated system using genion...
VISWANADHA SRIDHARA
- [gmx-users] Addition of Energy Term
Gaurav Porwal
- [gmx-users] Advise about a good software
Absalom Zamorano
- [gmx-users] Advise about a good software
Nancy Deng
- [gmx-users] analyzing amber trajectories with gromacs
Marie-Pierre Durrieu
- [gmx-users] Another problem
Michael Clark
- [gmx-users] Another problem
David
- [gmx-users] Re: Asking for help about Gromacs
Anton Feenstra
- [gmx-users] assembly loop and the C code
justkewlguy at yahoo.com
- [gmx-users] assembly loop and the C code
Erik Lindahl
- [gmx-users] Atomtype:CB
Nancy Deng
- [gmx-users] Atomtype:CB
Haberl Florian
- [gmx-users] Atomtype:CB
Nancy Deng
- [gmx-users] Atomtype:CB
Haberl Florian
- [gmx-users] AutoDock --> GMX
Arturas
- [gmx-users] AutoDock --> GMX
David van der Spoel
- [gmx-users] AutoDock --> GMX
Arturas
- [gmx-users] AutoDock --> GMX
David van der Spoel
- [gmx-users] AutoDock --> GMX
Arturas
- [gmx-users] AutoDock --> GMX
Marc F. Lensink
- [gmx-users] AutoDock --> GMX
Anton Feenstra
- [gmx-users] bam.gct
paloureiro at biof.ufrj.br
- [gmx-users] bam.gct
David
- [gmx-users] Basic question
mn2 at hw.ac.uk
- [gmx-users] Basic question
David van der Spoel
- [gmx-users] Bilayer + Peptide simulation
itai bloch
- [gmx-users] Bilayer + Peptide simulation
T.A.Wassenaar
- [gmx-users] Bilayer + Peptide simulation.
itai bloch
- [gmx-users] Bio-Image summer school in Paris this year
Marc Baaden
- [gmx-users] Bug (?) in dgdl.xvg
Maik Goette
- [gmx-users] Bug (?) in dgdl.xvg
Berk Hess
- [gmx-users] calculation of forces during a trajectory
Michael
- [gmx-users] Can entropy be gained via molecular dynamics
Ran Friedman
- [gmx-users] Can entropy be gained via molecular dynamics
zjim
- [gmx-users] Re:Can entropy be gained via molecular dynamics ?
Ing. Vojtech Spiwok
- Re: [gmx-users] Re:Can entropy be gained via molecular dynamics ?
zjim
- [gmx-users] Can I compare the force of pulling process?
Jinzhi Tan
- [gmx-users] Can i proceed with this warning?-"System has non-zero charge: 2.000002e+00"
balamurugan r
- [gmx-users] Can i proceed with this warning?-"System has non-zero charge: 2.000002e+00"
Florian Haberl
- [gmx-users] Can I use FEP with OPLS-AA?
Alexandre Suman de Araujo
- [gmx-users] Can I use FEP with OPLS-AA?
Maik Goette
- [gmx-users] Can't remove libpthreads from the link
Paolo Victor
- [gmx-users] Can't remove libpthreads from the link
David
- [gmx-users] Cant remove libpthreads from the link
Matt McMullen
- [gmx-users] Cant remove libpthreads from the link
David
- [gmx-users] change the protonation state...
Binbin Liu
- [gmx-users] charge during the free energy calculation
Binbin Liu
- [gmx-users] compilation with PGCC, MPICH-GM on x86_64
Hannes Barsch
- [gmx-users] Compiling CVS code on Alpha error
Yang Ye
- [gmx-users] Coul-14 + dihedral + torsion
Samuel Flores
- [gmx-users] Coul-14 + dihedral + torsion
David
- [gmx-users] Coulomb energies
Cesar Lopez
- [gmx-users] Coulomb energies
David
- [gmx-users] Coulomb energies
Cesar Lopez
- [gmx-users] Coulomb energies
Cesar Lopez
- [gmx-users] Coulomb energies
David van der Spoel
- [gmx-users] Coulomb energies
Cesar Lopez
- [gmx-users] cpp and m4
Alan Wilter Sousa da Silva
- [gmx-users] cpp and m4
David
- [gmx-users] cpp and m4
Erik Lindahl
- [gmx-users] Re: cpp and m4 (Erik Lindahl)
Alan Wilter Sousa da Silva
- [gmx-users] D value
Dinesh Pinisetty
- [gmx-users] D value
Dallas Warren
- [gmx-users] D value
Dinesh Pinisetty
- [gmx-users] D value
Dallas Warren
- [gmx-users] D value
Dinesh Pinisetty
- [gmx-users] D-aminoacids in OPLS
Guillem Portella
- [gmx-users] D-aminoacids in OPLS
Erik Lindahl
- [gmx-users] David, adding new atom types to gromacs "shell model"
xieyh at hkusua.hku.hk
- [gmx-users] David, adding new atom types to gromacs "shell model"
David
- [gmx-users] David, adding new atom types to gromacs "shell model"
xieyh at hkusua.hku.hk
- [gmx-users] David, adding new atom types to gromacs "shell model"
David
- [gmx-users] David, still polarization!
xieyh at hkusua.hku.hk
- [gmx-users] David, still polarization!
David van der Spoel
- [gmx-users] Diffusion Coeffecient
McMullen, Roger L
- [gmx-users] Diffusion Coeffecient
Nuno R. L. Ferreira
- [gmx-users] Diffusion coefficient
Dinesh Pinisetty
- [gmx-users] Diffusion coefficient
David van der Spoel
- [gmx-users] Discriminating between two kind of dimers
olivier Walker
- [gmx-users] DNA-protein
Nancy Deng
- [gmx-users] DNA-protein
Anton Feenstra
- [gmx-users] Re: DNA-protein
Michael Brunsteiner
- [gmx-users] DNA/RNA records for OPLS force field in GROMACS format.
Marc Kreissler
- [gmx-users] DNA/RNA records for OPLS force field in GROMACS format.
Marc Kreissler
- [gmx-users] DNA/RNA records for OPLS, part II
Andrey V. Golovin
- [gmx-users] DPPC/DPPE/H2O simulation
Sukit Leekumjorn
- [gmx-users] DPPC/DPPE/H2O simulation
X.Periole
- [gmx-users] Energy minimalization
Karel Berka
- [gmx-users] Energy minimalization
T.A.Wassenaar
- [gmx-users] Energy minimalization
Michael
- [gmx-users] Energy Minimization Problems
Gaurav Porwal
- [gmx-users] Energy Minimization Problems
David van der Spoel
- [gmx-users] Explicitly defined nonbonded LJ pair terms?
Michael Shirts
- [gmx-users] Explicitly defined nonbonded LJ pair terms?
David
- [gmx-users] Re: Extracing energy components
Huafeng Xu
- [gmx-users] Re: Extracing energy components
David
- [gmx-users] extract output files
Dinesh Pinisetty
- [gmx-users] extract output files
Dallas Warren
- [gmx-users] extract output files
Dinesh Pinisetty
- [gmx-users] extract output files
David
- [gmx-users] extract output files
Anton Feenstra
- [gmx-users] Extracting energy components
Huafeng Xu
- [gmx-users] Extracting energy components
Ilya Chorny
- [gmx-users] Re: Extracting energy components
Huafeng Xu
- [gmx-users] Re: Extracting energy components
David van der Spoel
- [gmx-users] Fatal error in position-restrained MD
Una Bjarnadottir
- [gmx-users] Fatal error of mdrun
Binbin Liu
- [gmx-users] Fatal error: number of coordinate file <cm5_b4ion.gro, 28016> does not match
Vlad Scepanovsky
- [gmx-users] Fatal error: number of coordinate file <cm5_b4ion.gro, 28016> does not match
Florian Haberl
- [gmx-users] Fatal error: Residue 'IAE' not found in residue topology database
David van der Spoel
- [gmx-users] Fatal error: Residue 'IAE' not found in residue topology database
Vlad Scepanovsky
- [gmx-users] fftw enabled compilation on sgi
Pradeep Kota
- [gmx-users] fftw enabled compilation on sgi
David
- [gmx-users] fftw enabled compilation on sgi
Haberl Florian
- [gmx-users] forcefield to handle phosphorylated residues (ffG43a1p)
Una Bjarnadottir
- [gmx-users] Free Energy / MM-PBSA
masi at nmr.mpibpc.mpg.de
- [gmx-users] free energy /mm-pbsa
masi at nmr.mpibpc.mpg.de
- [gmx-users] Freeze Velocity?
pappaj2 at rpi.edu
- [gmx-users] Freeze Velocity?
Erik Lindahl
- [gmx-users] Fw: error: interrupt SIGSEGV
Kolin
- [gmx-users] Fw: error: interrupt SIGSEGV
David van der Spoel
- [gmx-users] Fw: error: interrupt SIGSEGV
Kolin
- [gmx-users] Fw: error: interrupt SIGSEGV
David van der Spoel
- [gmx-users] Fwd: calculation of forces during a trajectory
Michael
- [gmx-users] Fwd: calculation of forces during a trajectory
Berk Hess
- [gmx-users] Fwd: calculation of forces during a trajectory
Michael
- [gmx-users] Fwd: calculation of forces during a trajectory
David van der Spoel
- [gmx-users] g_anaeig
narender maan
- [gmx-users] g_anaeig
T.A.Wassenaar
- [gmx-users] g_cluster
Andrew Beevers
- [gmx-users] g_cluster
Andrew Beevers
- [gmx-users] g_cluster
Nuno R. L. Ferreira
- [gmx-users] g_cluster
Nuno R. L. Ferreira
- [gmx-users] g_cluster
Nuno R. L. Ferreira
- [gmx-users] g_cluster - Cannot allocate memory
Nuno R. L. Ferreira
- [gmx-users] g_cluster - cannot allocate memory
Nuno R. L. Ferreira
- [gmx-users] g_enemat problem
Samuel Flores
- [gmx-users] g_enemat problem
David van der Spoel
- [gmx-users] Re: g_enemat problem
Huafeng Xu
- [gmx-users] g_energy: floating point exception
Pradeep Nair
- [gmx-users] g_hbond problem
Zhenting Gao
- [gmx-users] g_hbond problem
David van der Spoel
- [gmx-users] g_sas
Dinesh Pinisetty
- [gmx-users] g_sas
Dallas Warren
- [gmx-users] g_sas
Dinesh Pinisetty
- [gmx-users] g_sas
Dallas Warren
- [gmx-users] g_sas
Dinesh Pinisetty
- [gmx-users] g_sas
Dallas Warren
- [gmx-users] g_sas
parinald at unsl.edu.ar
- [gmx-users] genbox adding water
martin sippel
- [gmx-users] genbox molecule insertion
Lubos Vrbka
- [gmx-users] genbox molecule insertion
David van der Spoel
- [gmx-users] genbox nmol add water
martin sippel
- [gmx-users] genbox nmol add water
Dallas Warren
- [gmx-users] Re: genbox nmol add water (Dallas Warren)
Pim Schravendijk
- [gmx-users] genion
Nancy Deng
- [gmx-users] genion
Dallas Warren
- [gmx-users] genion
Björn Windshügel
- [gmx-users] genion
T.A.Wassenaar
- [gmx-users] genion
Dallas Warren
- [gmx-users] genion
Nancy Deng
- [gmx-users] genion
Nancy Deng
- [gmx-users] genion
Nancy Deng
- [gmx-users] genion
X.Periole
- [gmx-users] Genion error
chandran karunakaran
- [gmx-users] genion-Cl
Nancy Deng
- [gmx-users] genion-Cl
X.Periole
- [gmx-users] genion-Cl
Nancy Deng
- [gmx-users] genistein
Michal Kolinski
- [gmx-users] genistein
Florian Haberl
- [gmx-users] Re: gmx-users Digest, Vol 11, Issue 19: problem with adding a carbonate molecule to .rtp file
balamurugan r
- [gmx-users] Re: gmx-users Digest, Vol 11, Issue 62
Jon
- [gmx-users] gmxdump to check the position restraints
Jian Zou
- [gmx-users] gmxdump to check the position restraints
David
- [gmx-users] Re: gromacs help
Anton Feenstra
- [gmx-users] Gromos g53a6
Andrey V. Golovin
- [gmx-users] Gromos g53a6
Alan Wilter Sousa da Silva
- [gmx-users] grompp -debug gives MPI_INIT errors (but seems to run without -debug flag)
David
- [gmx-users] grompp -debug gives MPI_INIT errors (but seems to run without -debug flag)
Sabuj Pattanayek
- [gmx-users] grompp -shuffle causes unsettled water error during mpirun C mdrun (but not using -shuffle completes mpirun C mdrun)
Sabuj Pattanayek
- [gmx-users] grompp warning - serious or not?
Samantha Kaye
- [gmx-users] grompp warning - serious or not?
David van der Spoel
- [gmx-users] grompp warning - serious or not?
Samantha Kaye
- [gmx-users] grompp warning - serious or not?
Samantha Kaye
- [gmx-users] grompp warning - serious or not?
David van der Spoel
- [gmx-users] Harmonic potential
mn2 at hw.ac.uk
- [gmx-users] Harmonic potential
Andrey V Golovin
- [gmx-users] Harmonic potential
David
- [gmx-users] Harmonic potential
mn2 at hw.ac.uk
- [gmx-users] Harmonic potential
mn2 at hw.ac.uk
- [gmx-users] Harmonic potential
mn2 at hw.ac.uk
- [gmx-users] Harmonic potential
David van der Spoel
- [gmx-users] Harmonic potential
mn2 at hw.ac.uk
- [gmx-users] Harmonic potential
David van der Spoel
- [gmx-users] Harmonic potential
mn2 at hw.ac.uk
- [gmx-users] Harmonic potential
David van der Spoel
- [gmx-users] Harmonic potential
mn2 at hw.ac.uk
- [gmx-users] Harmonic potential
David van der Spoel
- [gmx-users] Harmonic potential
mn2 at hw.ac.uk
- [gmx-users] Harmonic potential
David van der Spoel
- [gmx-users] Harmonic potential
mn2 at hw.ac.uk
- [gmx-users] Harmonic potential
David
- [gmx-users] Harmonic potential
mn2 at hw.ac.uk
- [gmx-users] HELP
xiongxuqiong
- [gmx-users] HELP
David
- [gmx-users] Help converting GROMOS ff files to GROMACS
Moore, Jonathan (J)
- [gmx-users] Help converting GROMOS ff files to GROMACS
David
- [gmx-users] Help me
raj kumar
- [gmx-users] Re: Help on gromacs
David van der Spoel
- [gmx-users] Help to membranes pressure
Andrey V. Golovin
- [gmx-users] Help to membranes pressure
Absalom Zamorano
- [gmx-users] Help with a warning
Absalom Zamorano
- [gmx-users] Help with a warning
David van der Spoel
- [gmx-users] how to add a new potential to the system
コウ チ
- [gmx-users] how to add a new potential to the system
David van der Spoel
- [gmx-users] how to convert CHARMM force constant into Gromos force field?
David van der Spoel
- [gmx-users] how to convert CHARMM force constant into Gromos force field?
コウ チ
- [gmx-users] how to generate coordiantes based on protein or dna sequences
David
- [gmx-users] how to generate coordiantes based on protein or dna sequences
Jian Zou
- [gmx-users] how to transform the opls torsional angles parameter to Ryckaert-Bellemans form
Pawan Babel
- [gmx-users] how to transform the opls torsional angles parameter to Ryckaert-Bellemans form
zjim
- [gmx-users] I Can't create a topology file.
Vlad Scepanovsky
- [gmx-users] Implicit solvent
Samuel Flores
- [gmx-users] Install double precision gromacs on IA64 system
Jian Zou
- [gmx-users] Install double precision gromacs on IA64 system
David van der Spoel
- [gmx-users] Install double precision gromacs on IA64 system
Jian Zou
- [gmx-users] Install double precision gromacs on IA64 system
David van der Spoel
- [gmx-users] Install double precision gromacs on IA64 system
Jian Zou
- [gmx-users] Install double precision gromacs on IA64 system
David van der Spoel
- [gmx-users] Install double precision gromacs on IA64 system
Erik Lindahl
- [gmx-users] Install double precision gromacs on IA64 system
Jian Zou
- [gmx-users] install fftw & gmx on ia64 system & run parallel mdrun_mpi
Jian Zou
- [gmx-users] install fftw on IA64 system
Jian Zou
- [gmx-users] install fftw on IA64 system
David van der Spoel
- [gmx-users] install fftw on IA64 system
Jian Zou
- [gmx-users] install gromacs on AIX system
m-hatake at jaist.ac.jp
- [gmx-users] install gromacs on ia64 system
Jian Zou
- [gmx-users] install gromacs on ia64 system
David van der Spoel
- [gmx-users] install gromacs on ia64 system
Jian Zou
- [gmx-users] install gromacs on ia64 system
Michel Cuendet
- [gmx-users] install gromacs on ia64 system
Yang Ye
- [gmx-users] install gromacs on ia64 system
Erik Lindahl
- [gmx-users] install gromacs on ia64 system
Erik Lindahl
- [gmx-users] Re: install gromacs on ia64 system
Jian Zou
- [gmx-users] Re: install gromacs on ia64 system
Erik Lindahl
- [gmx-users] Installation and Start-Up
Michael Clark
- [gmx-users] Installation and Start-Up
Florian Haberl
- [gmx-users] Installation and Start-Up
Niko
- [gmx-users] ion dragging
Magnus Andersson
- [gmx-users] ions in PDB
Alan Wilter Sousa da Silva
- [gmx-users] ions in PDB
Avell Diroll
- [gmx-users] ions in PDB
Maik Goette
- [gmx-users] known bug? compiling gromacs 3.2.1 with gcc 3.3.5 using -march=athlon-whatever gives strange mdrun results on AMD athlon systems
David
- [gmx-users] known bug? compiling gromacs 3.2.1 with gcc 3.3.5 using -march=athlon-whatever gives strange mdrun results on AMD athlon systems
Sabuj Pattanayek
- [gmx-users] libXm.so.1 Gromacs Help
supakar at spymac.com
- [gmx-users] libXm.so.1 Gromacs Help
supakar at spymac.com
- [gmx-users] libXm.so.1 Gromacs Help
David van der Spoel
- [gmx-users] libXm.so.1 Gromacs Help
Sabuj Pattanayek
- [gmx-users] Lie calculation
Cesar Lopez
- [gmx-users] Lie calculation
David
- [gmx-users] Lipid Bilayer questions
Ramachandra Rao Gullapalli
- [gmx-users] Lipid Bilayer questions
Dallas Warren
- [gmx-users] LJ14 interactions on DPPC
Sukit Leekumjorn
- [gmx-users] LJ14 interactions on DPPC
David L. Bostick
- [gmx-users] mass density
Dinesh Pinisetty
- [gmx-users] mass density
David van der Spoel
- [gmx-users] mm-pbsa in gromacs
masi at nmr.mpibpc.mpg.de
- [gmx-users] Modeling Zinc in OPLS
Sandeep Somani
- [gmx-users] Modeling Zinc in OPLS
Maik Goette
- [gmx-users] Modeling Zinc in OPLS
Sandeep Somani
- [gmx-users] Modeling Zinc in OPLS
David van der Spoel
- [gmx-users] Modeling Zinc in OPLS
Anton Feenstra
- [gmx-users] Modeling Zinc in OPLS
Maik Goette
- [gmx-users] Modeling Zinc in OPLS
Maik Goette
- [gmx-users] Mpi problem
Kpiwara De X-nelo
- [gmx-users] Mpi problem
David van der Spoel
- [gmx-users] mpirun problem
mn2 at hw.ac.uk
- [gmx-users] mpirun problem
Florian Haberl
- [gmx-users] mpirun problem
mn2 at hw.ac.uk
- [gmx-users] mpirun problem
David
- [gmx-users] mpirun problem
Anton Feenstra
- [gmx-users] Nanotube simulation
Adrain Zhou
- [gmx-users] Nanotube simulation
Ignacio Rodriguez Fernandez
- [gmx-users] Nanotube simulation
Ignacio Rodriguez Fernandez
- [gmx-users] Nanotube simulation
David van der Spoel
- [gmx-users] Nanotube simulation
mprabha at fiu.edu
- [gmx-users] nb exclusion and pbc
Uwe Richter
- [gmx-users] nb exclusion and pbc
David van der Spoel
- [gmx-users] No access to Gaussian 03
Michael Clark
- [gmx-users] nonbonded LJ-parameters
Stephan Dammer
- [gmx-users] nonbonded LJ-parameters
David van der Spoel
- [gmx-users] nonbonded LJ-parameters
Berk Hess
- [gmx-users] Not enough ref_t and tau_t values
balamurugan r
- [gmx-users] Not enough ref_t and tau_t values
Florian Haberl
- [gmx-users] NPT: pressure coupling
Nancy Deng
- [gmx-users] NPT: pressure coupling
David
- [gmx-users] NPT: pressure coupling
Nancy Deng
- [gmx-users] NPT: pressure coupling
David
- [gmx-users] NPT: pressure coupling
parinald at unsl.edu.ar
- [gmx-users] nucleic acid PDB input files
Andrey V. Golovin
- [gmx-users] nucleic acid PDB input files
Ken Rotondi
- [gmx-users] nucleic acid PDB input files
Cameron Mura
- [gmx-users] nucleic acid PDB input files
Maik Goette
- [gmx-users] Nucleotide version of United Residue Potential
HYUN-CHUL KIM
- [gmx-users] Nucleotide version of United Residue Potential
David
- [gmx-users] Number of hydrogen bonds formed by water in the solvation shell
Huafeng Xu
- [gmx-users] Organic Solvents
Anthony Cruz
- [gmx-users] Organic Solvents
Dallas Warren
- [gmx-users] Organic Solvents
David van der Spoel
- [gmx-users] Organic Solvents
Anthony Cruz
- [gmx-users] Organic Solvents
David
- [gmx-users] Organic Solvents
Anthony Cruz
- [gmx-users] Please give a warning when configure doesn't find X11-dev
Li Daobing
- [gmx-users] PME vs Cut off
Hector Mtz-Seara
- [gmx-users] PME, LIE and charged systems
John Simms
- [gmx-users] PME, LIE and charged systems
Ismael
- [gmx-users] PME, LIE and charged systems
David
- [gmx-users] Re: PME, LIE and charged systems
John Simms
- [gmx-users] Re: PME, LIE and charged systems
David van der Spoel
- [gmx-users] Re: PME, LIE and charged systems
John Simms
- [gmx-users] Re: PME, LIE and charged systems
David
- [gmx-users] PME/Ewald
M.Naser
- [gmx-users] PME/Ewald
David van der Spoel
- [gmx-users] PME/Ewald
mn2 at hw.ac.uk
- [gmx-users] PME/Ewald
Jason de Joannis
- [gmx-users] PME/Ewald
mn2 at hw.ac.uk
- [gmx-users] PME/Ewald
Jason de Joannis
- [gmx-users] PME/Ewald
mn2 at hw.ac.uk
- [gmx-users] Polarized water model
xieyh at hkusua.hku.hk
- [gmx-users] Polarized water model
David van der Spoel
- [gmx-users] Re: Polarized water model
xieyh at hkusua.hku.hk
- [gmx-users] Re: Polarized water model
David
- [gmx-users] Re: Polarized water model
xieyh at hkusua.hku.hk
- [gmx-users] Re: Polarized water model
David van der Spoel
- [gmx-users] popc
Dinesh Pinisetty
- [gmx-users] POPE simulations
Sukit Leekumjorn
- [gmx-users] Potentials for Ions
Sowmianarayanan Rajamani
- [gmx-users] Potentials for Ions
Marc Baaden
- [gmx-users] pressure coupling with pbc=full
David van der Spoel
- [gmx-users] pressure coupling with pbc=full
Ester Chiessi
- [gmx-users] probelm with mdrun
balamurugan r
- [gmx-users] probelm with mdrun
Florian Haberl
- [gmx-users] Problem with "configure"; Athlon64_fedora Core3
olivier Walker
- [gmx-users] Problem with "configure"; Athlon64_fedora Core3
olivier Walker
- [gmx-users] Problem with "configure"; Athlon64_fedora Core3
david.evans at ulsop.ac.uk
- [gmx-users] Problem with "configure"; Athlon64_fedora Core3
Florian Haberl
- [gmx-users] Problem with "configure"; Athlon64_fedora Core3
Erik Lindahl
- [gmx-users] Problem with "configure"; Athlon64_fedora Core3
olivier Walker
- [gmx-users] problem with adding a carbonate molecule to .rtp file
balamurugan r
- [gmx-users] problem with adding a carbonate molecule to .rtp file
David van der Spoel
- [gmx-users] problem with Mn2+
Maximiliano Figueroa
- [gmx-users] problem with Mn2+
David
- [gmx-users] problem with Mn2+
Maximiliano Figueroa
- [gmx-users] problem with Mn2+
Maik Goette
- [gmx-users] problem with Mn2+
Yang Ye
- [gmx-users] Re: problem with Mn2+
David van der Spoel
- [gmx-users] Re: problem with Mn2+
Ing. Vojtech Spiwok
- [gmx-users] Problems with a PDB
Absalom Zamorano
- [gmx-users] Problems with a PDB
Nuno R. L. Ferreira
- [gmx-users] Problems with backwards FEP
Maik Goette
- [gmx-users] Problems with surface presure on bilayers and monolayers
paloureiro at biof.ufrj.br
- [gmx-users] Problems with surface presure on bilayers and monolayers
Hector Mtz-Seara
- [gmx-users] Problems with surface presure on bilayers and monolayers
Hector Mtz-Seara
- [gmx-users] protein unfolding
Xavier Periole
- [gmx-users] Re: protein unfolding
Aina Quintilla
- [gmx-users] Re: protein unfolding
Xavier Periole
- [gmx-users] protein unfolding
Aina Quintilla
- [gmx-users] Re: protein unfolding, gromacs parametrisation
Aina Quintilla
- [gmx-users] protein wandering away
Nancy Deng
- [gmx-users] protein wandering away
David
- [gmx-users] protein wandering away
Dallas Warren
- [gmx-users] protein wandering away AND binding free energy
Nancy Deng
- [gmx-users] protein wandering away AND binding free energy
David
- [gmx-users] Protonate on N- and C- termini
Binbin Liu
- [gmx-users] Protonate on N- and C- termini
Erik Lindahl
- [gmx-users] Protonate on N- and C- termini
Xavier Periole
- [gmx-users] pull code and constrain distance--help-please
John Simms
- [gmx-users] pull code and constrain distance--help-please
Berk Hess
- [gmx-users] pull code and constrain distance--help-please
Berk Hess
- [gmx-users] Re: pull code and constrain distance--help-please
John Simms
- [gmx-users] Pull-Code: Harmonic potential
David
- [gmx-users] Pull-Code: Harmonic potential
mn2 at hw.ac.uk
- [gmx-users] Question concerning license
Michael Clark
- [gmx-users] Question concerning license
David van der Spoel
- [gmx-users] Question concerning license
lieven at ultr.vub.ac.be
- [gmx-users] Re adding carbonate ion to the topolgy file
balamurugan r
- [gmx-users] Re adding carbonate ion to the topolgy file
David van der Spoel
- [gmx-users] Refolding modeling
egorov
- [gmx-users] Refolding modeling
Ansuman Lahiri
- [gmx-users] regarding particle movements
Maillist
- [gmx-users] regarding particle movements
David van der Spoel
- [gmx-users] Rigid molecules in system
xzp02 at mails.tsinghua.edu.cn
- [gmx-users] Rigid molecules in system
David van der Spoel
- [gmx-users] Scaling non-bonded interactions
Glenn Johnson
- [gmx-users] Scaling non-bonded interactions
David van der Spoel
- [gmx-users] segmentation fault in md simulation
Monique Brito
- [gmx-users] Soft-core parms for FEP
Binbin Liu
- [gmx-users] Soft-core parms for FEP
David van der Spoel
- [gmx-users] Solvents
Anthony Cruz
- [gmx-users] Solvents
David van der Spoel
- [gmx-users] specbond
chandran karunakaran
- [gmx-users] specbond
David
- [gmx-users] Special atom distance matrix
Dana Dogaru
- [gmx-users] Special atom distance matrix
David van der Spoel
- [gmx-users] Special atom distance matrix
Anton Feenstra
- [gmx-users] still that install problem
louyucun at seas.upenn.edu
- [gmx-users] still that install problem
David van der Spoel
- [gmx-users] system reshaped on itanium II
Jens Krüger
- [gmx-users] system reshaped on itanium II
David
- [gmx-users] system reshaped on itanium II
Jens Krüger
- [gmx-users] system reshaped on itanium II
David van der Spoel
- [gmx-users] terminate sugars
Glenn Johnson
- [gmx-users] terminate sugars
Andrey V. Golovin
- [gmx-users] terminate sugars
Glenn Johnson
- [gmx-users] The pdb2gmx conversion
Vlad Scepanovsky
- [gmx-users] The pdb2gmx conversion
David van der Spoel
- [gmx-users] The temperature change
Gia Maisuradze
- [gmx-users] The temperature change
David
- [gmx-users] The temperature change
Gia Maisuradze
- [gmx-users] Tip5p
sridhar maddipati
- [gmx-users] twin-range cut-offs and OPLS
Marco Möller
- [gmx-users] twin-range cut-offs and OPLS
David van der Spoel
- [gmx-users] Re: Re: [gmx-users] twin-range cut-offs and OPLS
David van der Spoel
- [gmx-users] Umbrella samling
mn2 at hw.ac.uk
- [gmx-users] Unable to reproduce DPPC benchmark
Pietro Lopriore
- [gmx-users] Unknown argument: spc216.gro Fatal error: Program genbox halted
Vlad Scepanovsky
- [gmx-users] Unknown argument: spc216.gro Fatal error: Program genbox halted
David
- [gmx-users] Urea parameterization
David van der Spoel
- [gmx-users] Urea parameterization
Alexander
- [gmx-users] using tpbconv for continuing parallel jobs
Hwankyu Lee
- [gmx-users] using tpbconv for continuing parallel jobs
David van der Spoel
- [gmx-users] Version error running mdrun
Jordi Camps
- [gmx-users] Version error running mdrun
David
- [gmx-users] Version error running mdrun
Jordi Camps
- [gmx-users] Version error running mdrun
Jordi Camps
- [gmx-users] Version error running mdrun
David van der Spoel
- [gmx-users] Version error running mdrun
Jordi Camps
- [gmx-users] Version error running mdrun
David van der Spoel
- [gmx-users] Version error running mdrun
Jordi Camps
- [gmx-users] Version error running mdrun
David van der Spoel
- [gmx-users] Version error running mdrun
Jordi Camps
- [gmx-users] Version error running mdrun
David van der Spoel
- [gmx-users] Version error running mdrun
Jordi Camps
- [gmx-users] Re: viewing animation
Erik Lindahl
- [gmx-users] volume of active site
Wei Fu
- [gmx-users] volume of active site
Nuno R. L. Ferreira
- [gmx-users] volume of active site
Nuno R. L. Ferreira
- [gmx-users] volume of active site
Marc F. Lensink
- [gmx-users] volume of active site
Anton Feenstra
- [gmx-users] water compressibility under different temperature and pressure
David van der Spoel
- [gmx-users] water compressibility under different temperature and pressure
Jian Zou
- [gmx-users] water compressibility under different temperature and pressure
Jian Zou
- [gmx-users] water_polarization
xieyh at hkusua.hku.hk
- [gmx-users] water_polarization
David van der Spoel
- [gmx-users] x2top - wrong mass in .top file
Jon
- [gmx-users] x2top - wrong mass in .top file
David
- [gmx-users] xtc files
Dinesh Pinisetty
- [gmx-users] xtc files
David
- [gmx-users] Z-density profile
mn2 at hw.ac.uk
- [gmx-users] Z-density profile
David van der Spoel
- [gmx-users] Z-density profile
mn2 at hw.ac.uk
Last message date:
Thu Mar 31 22:25:14 CEST 2005
Archived on: Thu Nov 14 12:01:30 CET 2013
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