[gmx-users] index definition

Nancy Deng jdeng at adrik.bchs.uh.edu
Fri May 6 00:30:48 CEST 2005

Hi Diego,

thank you  so much for the link, i did find one record extremely helpful. Now i have no problem to write out dihedra angles for certain residues from my trajectory. 

  ----- Original Message ----- 
  From: diego vallejo 
  To: gmx-users at gromacs.org 
  Sent: Thursday, May 05, 2005 1:09 PM
  Subject: Re: [gmx-users] index definition

  I don't know, perhaps this thread is what you need: 


  (the search form in http://www.gromacs.org/search/index.php is really fine).


   At 03:39 p.m. 05/05/2005, you wrote:

    Hi Deigo,
    Thank ... It works perfect now.
    Do you have any clue to define the dihedral angle among any four specified atoms??? If possible, I am thinking to measure the angle between two nearby helix in terms of the customized "dihedrals"....


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