May 2005 Archives by subject
Starting: Mon May 2 03:32:10 CEST 2005
Ending: Tue May 31 23:58:21 CEST 2005
Messages: 534
- [gmx-users] (no subject)
Jason de Joannis
- [gmx-users] (no subject)
ksr at chemistry.umass.edu
- [gmx-users] (no subject)
Berk Hess
- [gmx-users] (no subject)
Anton Feenstra
- [gmx-users] (no subject)
M.Naser
- [gmx-users] (no subject)
David
- [gmx-users] (no subject)
M.Naser
- [gmx-users] (no subject)
David
- [gmx-users] .top error question
Ramachandra Rao Gullapalli
- [gmx-users] .top error question
Kai Zhuang
- [gmx-users] .top error question
Anton Feenstra
- [gmx-users] 1-4 interaction VS. normal Coulomb interaction
xieyh at hkusua.hku.hk
- [gmx-users] [Fwd: kindly help!]
David van der Spoel
- [gmx-users] [merge option in pdb2gmx
Valentin Gogonea
- [gmx-users] [merge option in pdb2gmx
David van der Spoel
- [gmx-users] [merge option in pdb2gmx
Valentin Gogonea
- [gmx-users] [merge option in pdb2gmx
David van der Spoel
- [gmx-users] [merge option in pdb2gmx
Valentin Gogonea
- [gmx-users] [merge option in pdb2gmx
David
- [gmx-users] [merge option in pdb2gmx
Valentin Gogonea
- [gmx-users] [Pairs] parameters input format
Paul A. Rowntree
- [gmx-users] [Pairs] parameters input format
Berk Hess
- [gmx-users] a flat plane boundary condition
Beckett W Sterner
- [gmx-users] a flat plane boundary condition
David
- [gmx-users] Re: a flat plane boundary condition
Beckett W Sterner
- [gmx-users] Re: a flat plane boundary condition
David
- [gmx-users] Re: a flat plane boundary condition
Beckett W Sterner
- [gmx-users] Re: a flat plane boundary condition
David
- [gmx-users] a flat plane boundary condition
Jason de Joannis
- [gmx-users] about complex MD
Natapol Pornputtapong
- [gmx-users] about complex MD
David
- [gmx-users] Re: about complex MD
Natapol Pornputtapong
- [gmx-users] Re: about complex MD
David van der Spoel
- [gmx-users] about double precision gromacs run
protim chakraborti
- [gmx-users] about double precision gromacs run
Haberl Florian
- [gmx-users] ACE group in OPLS
Robert Hughes
- [gmx-users] ACE group in OPLS
Uwe Richter
- [gmx-users] adding a metal ion to the force field
David van der Spoel
- [gmx-users] adding a metal ion to the force field
balamurugan r
- [gmx-users] adding a metal ion to the force field
Jian Zou
- [gmx-users] adding a weak harmonic potential on one box side
Jennifer Rendell
- [gmx-users] Adding Ca ion!
Prettina Anto_Louis
- [gmx-users] Adding Ca ion!
Anton Feenstra
- [gmx-users] Adding ions
Jordi Camps
- [gmx-users] Adding ions
Kai Zhuang
- [gmx-users] Adding ions
Jordi Camps
- [gmx-users] are words in top file case-sensitive?
David van der Spoel
- [gmx-users] are words in top file case-sensitive?
Jian Zou
- [gmx-users] Atom type of the carbon atom in S=C- for Gromacsforce filed?
Zhiguo Liu
- [gmx-users] Atom type of the carbon atom in S=C- for Gromacs force filed?
David
- [gmx-users] Atom type of the carbon atom in S=C- for Gromacs force filed?
Zhiguo Liu
- [gmx-users] Atom Types, grompp problem!!
Una Bjarnadottir
- [gmx-users] Atom Types, grompp problem!!
David
- [gmx-users] Atom Types, grompp problem!!
Una Bjarnadottir
- [gmx-users] Atom Types, grompp problem!!
David
- [gmx-users] Atom Types, grompp problem!!
Una Bjarnadottir
- [gmx-users] Atom Types, grompp problem!!
David van der Spoel
- [gmx-users] Atom Types, grompp problem!!
Anton Feenstra
- [gmx-users] Avoiding calculation on some degrees of freedom
gianluca santarossa
- [gmx-users] Avoiding calculation on some degrees of freedom
David van der Spoel
- [gmx-users] Avoiding calculation on some degrees of freedom
gianluca.santarossa
- [gmx-users] Avoiding calculation on some degrees of freedom
David van der Spoel
- [gmx-users] Avoiding calculation on some degrees of freedom
Anton Feenstra
- [gmx-users] Bob Arenburg/Austin/IBM is out of the office.
Bob Arenburg
- [gmx-users] Box dimension-Mdrun
Anton Feenstra
- [gmx-users] calculate torsional energy of the ligand from thetrajectory (fwd)
Nancy Deng
- [gmx-users] calculate torsional energy of the ligand from the trajectory
Minami Mo
- [gmx-users] calculate torsional energy of the ligand from the trajectory
David
- [gmx-users] calculate torsional energy of the ligand from the trajectory
Anton Feenstra
- [gmx-users] calculate torsional energy of the ligand from the trajectory (fwd)
David van der Spoel
- [gmx-users] calculation of pKa
balamurugan r
- [gmx-users] changing t0 with eneconv
Alexandre Suman de Araujo
- [gmx-users] cluster molecules
Santi Esteban Martin
- [gmx-users] cluster molecules
David van der Spoel
- [gmx-users] Combining two molecules in one simulation
Chris Gaughan
- [gmx-users] Combining two molecules in one simulation
David
- [gmx-users] compiled version
Stefania Albrizio
- [gmx-users] compiled version
Andrea Carotti
- [gmx-users] constraints and PME options
Jian Zou
- [gmx-users] constraints and PME options
David van der Spoel
- [gmx-users] Conversion
Jordi Camps
- [gmx-users] Conversion
Anton Feenstra
- [gmx-users] RE: Converting from AMBER to GROMACS
Anton Feenstra
- [gmx-users] RE: Converting from AMBER to GROMACS
Jordi Camps
- [gmx-users] RE: Converting from AMBER to GROMACS
Anton Feenstra
- [gmx-users] Corrupt trajectories
Amil Anderson
- [gmx-users] Corrupt trajectories
David
- [gmx-users] Re: corrupt trajectory
Amil Anderson
- [gmx-users] Re: corrupt trajectory
David
- [gmx-users] Re: corrupt trajectory
Diego Enry
- [gmx-users] Counting particles in a particular region
xi zhao
- [gmx-users] Counting particles in a particular region
Oliver Beckstein
- [gmx-users] Counting particles in a particular region
xi zhao
- [gmx-users] Counting particles in a particular region
xi zhao
- [gmx-users] Counting particles in a particular region
Steven Spronk
- [gmx-users] Counting particles in a particular region
xi zhao
- [gmx-users] creating a new non bonded potential
Arijit Maitra
- [gmx-users] CVS build on AIX
David Skinner
- [gmx-users] CVS build on AIX
Yang Ye
- [gmx-users] CVS build on AIX
Erik Lindahl
- [gmx-users] CVS REMD
ksr at chemistry.umass.edu
- [gmx-users] CVS REMD
David
- [gmx-users] Differences in the values of RMSD
Jair
- [gmx-users] Differences in the values of RMSD
David
- [gmx-users] Different coulomb energies of protein by Cut-off and PME
Anton Feenstra
- [gmx-users] dual-core performance
Justin MacCallum
- [gmx-users] dual-core performance
David van der Spoel
- [gmx-users] dual-core performance
Anton Feenstra
- [gmx-users] dual-core performance
Erik Lindahl
- [gmx-users] dynamic search and simulated annealing
UCT Staff Member - Jackson
- [gmx-users] dynamic search and simulated annealing
Mu Yuguang (Dr)
- [gmx-users] dynamic search and simulated annealing
David van der Spoel
- [gmx-users] ED postional fluctuation
Andrea Carotti
- [gmx-users] ED postional fluctuation
Berk Hess
- [gmx-users] ED postional fluctuation
Anton Feenstra
- [gmx-users] ED sampling
Thomas Stockner
- [gmx-users] ED sampling
Bert de Groot
- [gmx-users] ED sampling and overall rotation
Thomas Stockner
- [gmx-users] ED sampling and overall rotation
Bert de Groot
- [gmx-users] energy units
Anton Feenstra
- [gmx-users] energy_excl in vacuum.
xieyh at hkusua.hku.hk
- [gmx-users] energy_excl in vacuum.
David van der Spoel
- [gmx-users] equilibration & g_rdf
Magnus Andersson
- [gmx-users] Excessive compute time using PME
Jordi Camps
- [gmx-users] Excessive compute time using PME
David
- [gmx-users] Excessive compute time using PME
Jordi Camps
- [gmx-users] Excessive compute time using PME
David
- [gmx-users] Excessive compute time using PME
Jordi Camps
- [gmx-users] Excessive compute time using PME
David van der Spoel
- [gmx-users] Excessive compute time using PME
Jordi Camps
- [gmx-users] Excessive compute time using PME
David van der Spoel
- [gmx-users] Excessive compute time using PME
Jordi Camps
- [gmx-users] Excessive compute time using PME
Anton Feenstra
- [gmx-users] Excessive compute time using PME
Jordi Camps
- [gmx-users] Excessive compute time using PME
David van der Spoel
- [gmx-users] Re: Excessive compute time using PME
Jason de Joannis
- [gmx-users] Excessive compute time using PME
Jordi Camps
- [gmx-users] exclusions indices
xieyh at hkusua.hku.hk
- [gmx-users] exclusions indices
David van der Spoel
- [gmx-users] extract coordinates from tpr files
gianluca santarossa
- [gmx-users] extract coordinates from tpr files
David van der Spoel
- [gmx-users] extract coordinates from tpr files
Anton Feenstra
- [gmx-users] Fftw and gromac build
Krewson, Tom
- [gmx-users] Fftw and gromac build
Erik Lindahl
- [gmx-users] Fftw and gromac build
Erik Lindahl
- [gmx-users] Fftw and gromac build
Krewson, Tom
- [gmx-users] Fw: About MPIRUN (Chuanjie Wu) Errors
chuanjiewu at 126.com
- [gmx-users] Fw: About MPIRUN (Chuanjie Wu) Errors
David
- [gmx-users] Fwd: asking for help with dual-topology for TI
Lei Zhou
- [gmx-users] Fwd: asking for help with dual-topology for TI
Anton Feenstra
- Fwd: Re: [gmx-users] Differences in the values of RMSD
Jair
- [gmx-users] g_analyze
herbst at fhi-berlin.mpg.de
- [gmx-users] g_analyze
Berk Hess
- [gmx-users] g_angle output
UCT Staff Member - Jackson
- [gmx-users] g_angle output
David van der Spoel
- [gmx-users] g_cluster
Nancy Deng
- [gmx-users] g_cluster
David
- [gmx-users] g_cluster
Nancy Deng
- [gmx-users] g_helix
Prasad Gajula
- [gmx-users] g_helix
Kai Zhuang
- [gmx-users] g_lie and PME
Lei Zhou
- [gmx-users] g_lie and PME
Anton Feenstra
- [gmx-users] g_lie and PME
Jens Krüger
- [gmx-users] g_lie and PME
Lei Zhou
- [gmx-users] g_rdf: angle dependence and normalization
Attilio
- [gmx-users] g_rms Fatal error: Error: Too many iterations in routine JACOBI
Anthony Cruz
- [gmx-users] g_rms Fatal error: Error: Too many iterations in routine JACOBI
Xavier Periole
- [gmx-users] g_rms Fatal error: Error: Too many iterations in routine JACOBI
Anton Feenstra
- [gmx-users] g_rms Fatal error: Error: Too many iterations in routine JACOBI
Anthony Cruz
- [gmx-users] g_rms Fatal error: Error: Too many iterations in routine JACOBI
Xavier Periole
- [gmx-users] g_rms Fatal error: Error: Too many iterations in routine JACOBI
Anthony Cruz
- [gmx-users] GDP and GTP topologies
Sekar Ramachandran
- [gmx-users] GDP and GTP topologies
Ruben M Buey
- [gmx-users] generating gro files using pdb2gmx without adding hydrogen
balamurugan r
- [gmx-users] generating gro files using pdb2gmx without adding hydrogen
David van der Spoel
- [gmx-users] generating gro files using pdb2gmx without adding hydrogen
Kai Zhuang
- [gmx-users] getting started
Joshua D. Moore
- [gmx-users] gmx v3.1 vs v3.2
Derrick Guang Yuh Lee
- [gmx-users] Re: gmx-users Digest, Vol 13, Issue 26
Anil Kumar
- [gmx-users] Re: gmx-users Digest, Vol 13, Issue 28
Alessandra Villa
- [gmx-users] Re: gmx-users Digest, Vol 13, Issue 71
Anil Kumar
- [gmx-users] Re: gmx-users Digest, Vol 13, Issue 73
Jason de Joannis
- [gmx-users] Re: gmx-users Digest, Vol 13, Issue 73
David
- [gmx-users] gmx_rescue
Amil Anderson
- [gmx-users] Gromacs 3.2.1 fftw and compatible lam versions
Krewson, Tom
- [gmx-users] Gromacs 3.2.1 fftw and compatible lam versions
David
- [gmx-users] Grompp error
Monique Brito
- [gmx-users] Grompp error
Andrea Carotti
- [gmx-users] Grompp error
Anton Feenstra
- [gmx-users] Grompp error
David van der Spoel
- [gmx-users] Grompp error
Anton Feenstra
- [gmx-users] Grompp error
Monique Brito
- [gmx-users] Grompp Error (No default Ryckaert-Bell)
Dongsheng Zhang
- [gmx-users] Grompp error ---Thanks!
Monique Brito
- [gmx-users] Grompp error!!!
Monique Brito
- [gmx-users] grompp fatal error
Wang Zhun
- [gmx-users] grompp fatal error
Anton Feenstra
- [gmx-users] grompp fatal error
Wang Zhun
- [gmx-users] grompp fatal error
Anton Feenstra
- [gmx-users] Having some lam issues
Dallas B. Warren
- [gmx-users] Having some lam issues
Dallas B. Warren
- [gmx-users] Help with eneconv
Alexandre Suman de Araujo
- [gmx-users] Help with eneconv
Alexandre Suman de Araujo
- [gmx-users] Help with eneconv
Alexandre Suman de Araujo
- [gmx-users] Help with eneconv
Xavier Periole
- [gmx-users] Help with eneconv
Berk Hess
- [gmx-users] Help with eneconv
Xavier Periole
- [gmx-users] Help with eneconv
Anton Feenstra
- [gmx-users] Help with position restrains for heterodimer system.
itai bloch
- [gmx-users] Help with position restrains for heterodimer system.
Xavier Periole
- [gmx-users] Help with position restrains for heterodimer system.
Xavier Periole
- [gmx-users] Help with position restrains for heterodimer system.
itai bloch
- [gmx-users] Help with position restrains for heterodimer system.
Xavier Periole
- [gmx-users] help!
xi zhao
- [gmx-users] help!
David van der Spoel
- [gmx-users] help!
xi zhao
- [gmx-users] Help!
Simonetta Soro
- [gmx-users] Help!
David
- [gmx-users] Help: Analysis large interdomain motion
Anton Feenstra
- [gmx-users] How do I run sd, cg in Gromacs 3.2
supakar at spymac.com
- [gmx-users] how much faster it is?
Marcin Wojdyr
- [gmx-users] how much faster it is?
David
- [gmx-users] How to add user-specific force field parameters in Gromacs?
chuanjiewu at 126.com
- [gmx-users] How to add user-specific force field parameters in Gromacs?
David
- [gmx-users] How to apply distance restraints.
Kirti Patel
- [gmx-users] How to apply distance restraints.
Kirti Patel
- [gmx-users] how to compile lesstif and gromacs???
rahul karyappa
- [gmx-users] How to fix four different atoms of diffrent residue in tetrahedral geometry while MD.
Anton Feenstra
- [gmx-users] How to fix four different atoms of diffrent residue in tetrahedral geometry while MD.
Anil Kumar
- [gmx-users] How to get the last shapshot from md.trr or md.xtc file
X.Periole
- [gmx-users] How to get the last shapshot from md.trr or md.xtc file
chiloo Laohpongspaisan
- [gmx-users] how to order atoms in GRO acording groups ?
SemteX
- [gmx-users] how to order atoms in GRO acording groups ?
Anton Feenstra
- [gmx-users] How to screen Coulomb interactions between some pairs.
xieyh at hkusua.hku.hk
- [gmx-users] How to screen Coulomb interactions between some pairs.
David
- [gmx-users] How to screen Coulomb interactions between some pairs.
xieyh at hkusua.hku.hk
- [gmx-users] how to set "gen_vel" in mdp file and continue
Jian Zou
- [gmx-users] how to set "gen_vel" in mdp file and continue
X.Periole
- [gmx-users] how to set "gen_vel" in mdp file and continue
David van der Spoel
- [gmx-users] how to set "gen_vel" in mdp file and continue a crashed run
Xavier Periole
- [gmx-users] how to set "gen_vel" in mdp file and continue a crashed run
Xavier Periole
- [gmx-users] how to set "gen_vel" in mdp file and continue a crashed run
Xavier Periole
- [gmx-users] how to set "gen_vel" in mdp file and continue a crashed run
Jian Zou
- [gmx-users] how to set "gen_vel" in mdp file and continue a crashed run
Jian Zou
- [gmx-users] how to set "gen_vel" in mdp file and continue a crashed run
Jian Zou
- [gmx-users] how to set "gen_vel" in mdp file and continue a crashed run
Jian Zou
- [gmx-users] increase the number of atoms in tip5p
Lin Zhen
- [gmx-users] increase the number of atoms in tip5p
David
- [gmx-users] index definition
Nancy Deng
- [gmx-users] index definition
diego vallejo
- [gmx-users] index definition
Nancy Deng
- [gmx-users] index definition
diego vallejo
- [gmx-users] index definition
Nancy Deng
- [gmx-users] install-topolDATA] Error 1
Lin Zhen
- [gmx-users] install-topolDATA] Error 1
David van der Spoel
- [gmx-users] Installation
Nathan Moore
- [gmx-users] Invalid directive dihherals with H
Farid Sa'Adedin
- [gmx-users] Invalid directive dihherals with H
Farid Sa'Adedin
- [gmx-users] Invalid directive dihherals with H
David
- [gmx-users] Invalid directive dihherals with H
Farid Sa'Adedin
- [gmx-users] Invalid directive dihherals with H
David
- [gmx-users] Invalid directive dihherals with H
Farid Sa'Adedin
- [gmx-users] Invalid directive dihherals with H
David van der Spoel
- [gmx-users] Invalid directive dihherals with H
Farid Sa'Adedin
- [gmx-users] Iron in OPLS
Maik Goette
- [gmx-users] Iron in OPLS
Prasad Gajula
- [gmx-users] kindly guide me!
Prettina Anto_Louis
- [gmx-users] LIE equation
Cesar Lopez
- [gmx-users] LIE equation
David
- [gmx-users] limitations in tau_t and ref_t values
Monique Brito
- [gmx-users] limitations in tau_t and ref_t values
Berk Hess
- [gmx-users] limitations in tau_t and ref_t values
David van der Spoel
- [gmx-users] Lincs again
Osmany Guirola Cruz
- [gmx-users] Lincs again
Osmany Guirola Cruz
- [gmx-users] Lincs again
Osmany Guirola Cruz
- [gmx-users] Lincs again
Haberl Florian
- [gmx-users] Lincs again
Kai Zhuang
- [gmx-users] LINCS constrain problem
Osmany Guirola Cruz
- [gmx-users] linux cluster performance
Alok
- [gmx-users] linux cluster performance
David
- [gmx-users] linux cluster performance
Christian Burisch
- [gmx-users] LR coulomb interaction
Michal Kolinski
- [gmx-users] LR coulomb interaction
David
- [gmx-users] LR coulomb interaction
Steven Spronk
- [gmx-users] LR coulomb interaction ?
Michal Kolinski
- [gmx-users] LR coulomb interaction ?
Michal Kolinski
- [gmx-users] LR coulomb intractions
strony_w_w_w at op.pl
- [gmx-users] LysH sidechain charges in OPLS
Robert Hughes
- [gmx-users] make_ndx
M.Naser
- [gmx-users] make_ndx
David
- [gmx-users] make_ndx segmentation error
Jian Zou
- [gmx-users] make_ndx segmentation error
David
- [gmx-users] make_ndx segmentation error
zouj01 at mails.tsinghua.edu.cn
- [gmx-users] MD on a protein region
Anton Feenstra
- [gmx-users] MD simulations of flexible CO2
iskarmou at cc.uoa.gr
- [gmx-users] MD simulations of flexible CO2
David
- [gmx-users] MD simulations of flexible CO2
iskarmou at cc.uoa.gr
- [gmx-users] MD simulations of flexible CO2
David van der Spoel
- [gmx-users] merge option in pdb2gmx
Valentin Gogonea
- [gmx-users] merge option in pdb2gmx
David van der Spoel
- [gmx-users] merge option in pdb2gmx
Anton Feenstra
- [gmx-users] Minimisation with and without water !
Prettina Anto_Louis
- [gmx-users] molecule name conflict?
Jian Zou
- [gmx-users] molecule name conflict? [was: Trajectory Problem]
Anton Feenstra
- [gmx-users] multiple "define" statements...
Ken Rotondi
- [gmx-users] multiple "define" statements...
David van der Spoel
- [gmx-users] multiple data sets in g_analyze
herbst at fhi-berlin.mpg.de
- [gmx-users] multiple data sets in g_analyze
Berk Hess
- [gmx-users] multiple data sets in g_analyze
herbst at fhi-berlin.mpg.de
- [gmx-users] multiple data sets in g_analyze
Berk Hess
- [gmx-users] multiple data sets in g_analyze
herbst at fhi-berlin.mpg.de
- [gmx-users] name a molecule
Jian Zou
- [gmx-users] need help
protim chakraborti
- [gmx-users] need help
David van der Spoel
- [gmx-users] need help
Pradip Kumar Biswas
- [gmx-users] New GROMOS FF
Maik Goette
- [gmx-users] New GROMOS FF
Anton Feenstra
- [gmx-users] New GROMOS FF
Maik Goette
- [gmx-users] New GROMOS FF
Xavier Periole
- [gmx-users] New Gromos FF
Rainer Böckmann
- [gmx-users] New Gromos FF
Rainer Böckmann
- [gmx-users] New GROMOS FF
Andrey V. Golovin
- [gmx-users] New GROMOS FF
Maik Goette
- [gmx-users] New GROMOS FF
Alessandra Villa
- [gmx-users] non-Myrinet Gromacs
David van der Spoel
- [gmx-users] non-Myrinet Gromacs
Anton Feenstra
- [gmx-users] non-Myrinet Gromacs
Krewson, Tom
- [gmx-users] non-Myrinet Gromacs
Yang Ye
- [gmx-users] Normal Mode Analysis on Calphas only ??
Marc Baaden
- [gmx-users] Normal Mode Analysis on Calphas only ??
Xavier Periole
- [gmx-users] Normal Mode Analysis on Calphas only ??
Berk Hess
- [gmx-users] Normal Mode Analysis on Calphas only ??
Bert de Groot
- [gmx-users] Normal Mode Analysis on Calphas only ??
Berk Hess
- [gmx-users] Normal Mode Analysis on Calphas only ??
Nguyen Hoang Phuong
- [gmx-users] Normal Mode Analysis on Calphas only ??
Berk Hess
- [gmx-users] Normal Mode Analysis on Calphas only ??
Marc Baaden
- [gmx-users] Normal mode eigenvalue units, nm^-2 ??
Marc Baaden
- [gmx-users] Normal mode eigenvalue units, nm^-2 ??
Nguyen Hoang Phuong
- [gmx-users] Normal mode eigenvalue units, nm^-2 ??
Berk Hess
- [gmx-users] Normal mode eigenvalue units, nm^-2 ??
Berk Hess
- [gmx-users] Normal mode eigenvalue units, nm^-2 ??
Berk Hess
- [gmx-users] Normal mode eigenvalue units, nm^-2 ??
Marc Baaden
- [gmx-users] Normal mode eigenvalue units, nm^-2 ??
Marc Baaden
- [gmx-users] OPLS and FEP parameters
Maik Goette
- [gmx-users] parallel run error
sunita at chem.iitb.ac.in
- [gmx-users] parallel run error
Sanjay Nilapwar
- [gmx-users] parallel run errors
Ramachandra Rao Gullapalli
- [gmx-users] parallel run errors
Andrey V. Golovin
- [gmx-users] parallel run errors
Ramachandra Rao Gullapalli
- [gmx-users] parallel run errors
Sandeep Somani
- [gmx-users] parallel run errors
Anton Feenstra
- [gmx-users] pbc = xy
David
- [gmx-users] pbc = xy
Berk Hess
- [gmx-users] pbc = xy
David L. Bostick
- [gmx-users] pbc = xy
Jennifer Rendell
- [gmx-users] Performance
M.Naser
- [gmx-users] Performance
Anton Feenstra
- [gmx-users] Performance
David
- [gmx-users] Performance
M.Naser
- [gmx-users] Performance
Anton Feenstra
- [gmx-users] PME slows down
Jason de Joannis
- [gmx-users] PME slows down
David
- [gmx-users] potential energy
Anton Feenstra
- [gmx-users] Pressure coupling for bilayer
Itamar Kass
- [gmx-users] Pressure coupling for bilayer
itai bloch
- [gmx-users] Pressure coupling for bilayer
Anton Feenstra
- [gmx-users] Problem compiling GROMACS 3.2.1 with GCC 4.0.0
Arijit Tarafdar
- [gmx-users] Problem compiling GROMACS 3.2.1 with GCC 4.0.0
David
- [gmx-users] Problem compiling GROMACS 3.2.1 with GCC 4.0.0
Arijit Tarafdar
- [gmx-users] problem with genion
Youkun Gao
- [gmx-users] problem with genion
Dallas B. Warren
- [gmx-users] Pymol pdb
Chris Gaughan
- [gmx-users] question
protim chakraborti
- [gmx-users] question
David van der Spoel
- [gmx-users] Question about g_dist
Vlad Scepanovsky
- [gmx-users] Question about g_dist
Anton Feenstra
- [gmx-users] Question about g_dist. Any links.
Vlad Scepanovsky
- [gmx-users] Question about g_dist. Any links.
Anton Feenstra
- [gmx-users] Questions regarding the Vacuum forcefield andHistidinecharges
Anton Feenstra
- [gmx-users] Questions regarding the Vacuum force field andHistidine charges
Xavier Periole
- [gmx-users] Questions regarding the Vacuum force field andHistidine charges
Joanne Hanna
- [gmx-users] Questions regarding the Vacuum force field and Histidine charges
Xavier Periole
- [gmx-users] Questions regarding the Vacuum force field and Histidine charges
Joanne Hanna
- [gmx-users] Questions regarding the Vacuum forcefield andHistidinecharges
Joanne Hanna
- [gmx-users] Questions regarding the Vacuum forcefield andHistidine charges
Joanne Hanna
- [gmx-users] Questions regarding the Vacuum forcefield andHistidine charges
Steven Spronk
- [gmx-users] Re Invalid Directive Dihedrals with H
Farid Sa'Adedin
- [gmx-users] Re Invalid Directive Dihedrals with H
David van der Spoel
- [gmx-users] Re Invalid Directive Dihedrals with H
Farid Sa'Adedin
- [gmx-users] read trr by Fortran
xzp02 at mails.tsinghua.edu.cn
- [gmx-users] read trr by Fortran
David van der Spoel
- [gmx-users] rephrase my question about torsional restraints
David Mobley
- [gmx-users] rephrase my question about torsional restraints
David
- [gmx-users] rephrase my question about torsional restraints
David Mobley
- [gmx-users] rephrase my question about torsional restraints
David
- [gmx-users] rephrase my question about torsional restraints
David Mobley
- [gmx-users] rephrase my question about torsional restraints
David
- [gmx-users] replacement for FFTW
Nathan Moore
- [gmx-users] replacement for FFTW
David
- [gmx-users] replacement for FFTW
Nathan Moore
- [gmx-users] replacement for FFTW
David
- [gmx-users] Re: request for help.
Anton Feenstra
- [gmx-users] restart a crashed run with pull.ppa
Jian Zou
- [gmx-users] Restart from .gro and tip4p water
Francesco Mercuri
- [gmx-users] Restart from .gro and tip4p water
David van der Spoel
- [gmx-users] restarting on different cpu
acorrea at unisa.it
- [gmx-users] restarting on different cpu
David van der Spoel
- [gmx-users] restarting on different cpu
acorrea at unisa.it
- [gmx-users] restraints
David Mobley
- [gmx-users] Retaining only .xtc files and deleting .trr files
sunita at chem.iitb.ac.in
- [gmx-users] Retaining only .xtc files and deleting .trr files
Kai Zhuang
- [gmx-users] Retaining only .xtc files and deleting .trr files
sunita at chem.iitb.ac.in
- [gmx-users] Retaining only .xtc files and deleting .trr files
Anton Feenstra
- [gmx-users] Retaining only .xtc files and deleting .trr files
Kai Zhuang
- [gmx-users] Retaining only .xtc files and deleting .trr files
sunita at chem.iitb.ac.in
- [gmx-users] rlist
Anton Feenstra
- [gmx-users] Root-mean-square deviation
Gia Maisuradze
- [gmx-users] Root-mean-square deviation
Gia Maisuradze
- [gmx-users] Root-mean-square deviation
Ran Friedman
- [gmx-users] Root-mean-square deviation
Gia Maisuradze
- [gmx-users] Running Gromacs in parallel with fftw
Lin Zhen
- [gmx-users] Running Gromacs in parallel with fftw
David
- [gmx-users] Running Gromacs in parallel with fftw
Peter C. Lai
- [gmx-users] Running Gromacs on Solaris 10
Lin Zhen
- [gmx-users] Running Gromacs on Solaris 10
David
- [gmx-users] Running mpi gromacs on solaris 9
itai bloch
- [gmx-users] RV: pregunta per la gromacs list
Jordi Camps
- [gmx-users] RV: pregunta per la gromacs list
David L. Bostick
- [gmx-users] RV: pregunta per la gromacs list
Berk Hess
- [gmx-users] Salt bridges
Andrea Carotti
- [gmx-users] screen Coulomb interactions.
xieyh at hkusua.hku.hk
- [gmx-users] screen Coulomb interactions.
David van der Spoel
- [gmx-users] screen Coulomb interactions.
xieyh at hkusua.hku.hk
- [gmx-users] screen Coulomb interactions.
Anton Feenstra
- [gmx-users] set gen_vel
Jair
- [gmx-users] set gen_vel
David
- [gmx-users] shell water and epsilon
David L. Bostick
- [gmx-users] shell water and epsilon
David van der Spoel
- [gmx-users] shell water and epsilon
David L. Bostick
- [gmx-users] shell water and epsilon
David
- [gmx-users] Short simulation
Anthony Cruz
- [gmx-users] Short simulation
David van der Spoel
- [gmx-users] Short simulation
Anthony Cruz
- [gmx-users] Short simulation
David van der Spoel
- [gmx-users] Simulated Annealing
Joanne Hanna
- [gmx-users] solvent molecules between protein-peptide complex
Anton Feenstra
- [gmx-users] solvent molecules between....another question...
acorrea at unisa.it
- [gmx-users] Solvent Optimization
M.Naser
- [gmx-users] Solvent Optimization
David van der Spoel
- [gmx-users] Something is wrong with parallel runs
Anton Feenstra
- [gmx-users] special case g_rdf
Magnus Andersson
- [gmx-users] special case g_rdf
David van der Spoel
- [gmx-users] System temperature
Arturas
- [gmx-users] System temperature
David van der Spoel
- [gmx-users] System temperature
Moore, Jonathan (J)
- [gmx-users] T-coupling of water and ion
Jian Zou
- [gmx-users] T-coupling of water and ion
zouj01 at mails.tsinghua.edu.cn
- [gmx-users] T-coupling of water and ion
David
- [gmx-users] T-coupling of water and ion
zouj01 at mails.tsinghua.edu.cn
- [gmx-users] T-coupling of water and ion
zouj01 at mails.tsinghua.edu.cn
- [gmx-users] T-coupling of water and ion
Anton Feenstra
- [gmx-users] T-coupling of water and ion
Jian Zou
- [gmx-users] T-coupling of water and ion
Anton Feenstra
- [gmx-users] Teethering/ Fatal error when using posre
Joanne Hanna
- [gmx-users] Teethering/ Fatal error when using posre
David van der Spoel
- [gmx-users] Teethering/ Fatal error when using posre
Joanne Hanna
- [gmx-users] Teethering/ Fatal error when using posre
Joanne Hanna
- [gmx-users] Temperature
Anthony Cruz
- [gmx-users] Temperature
David
- [gmx-users] Tethering
Joanne Hanna
- [gmx-users] Tethering
David van der Spoel
- [gmx-users] Tethering
Joanne Hanna
- [gmx-users] Tethering
T.A.Wassenaar
- [gmx-users] Tethering
Joanne Hanna
- [gmx-users] Tethering
David van der Spoel
- [gmx-users] Tethering
Anton Feenstra
- [gmx-users] Tethering
Joanne Hanna
- [gmx-users] Tethering
David van der Spoel
- [gmx-users] Tethering
Anton Feenstra
- [gmx-users] Time reversibility and settle
Francesco Mercuri
- [gmx-users] Time reversibility and settle
Berk Hess
- [gmx-users] Time reversibility and settle
Francesco Mercuri
- [gmx-users] Time reversibility and settle
Berk Hess
- [gmx-users] Time reversibility and settle
Francesco Mercuri
- [gmx-users] Time reversibility and settle
Berk Hess
- [gmx-users] TIP5P-E water
Lin Zhen
- [gmx-users] TIP5P-E water
David
- [gmx-users] TOPIC: PROBLEM WITH CENTRING PROTEIN IN A BOX
Vlad Scepanovsky
- [gmx-users] total charge
Lei Zhou
- [gmx-users] total charge
Anton Feenstra
- [gmx-users] Trajectory Problem
Anthony Cruz
- [gmx-users] Trajectory Problem
David van der Spoel
- [gmx-users] Trajectory Problem
Anthony Cruz
- [gmx-users] Trajectory Problem
David van der Spoel
- [gmx-users] Trajectory Problem
Anthony Cruz
- [gmx-users] Trajectory Problem
David van der Spoel
- [gmx-users] Trajectory Problem
Jian Zou
- [gmx-users] Trajectory Problem
T.A.Wassenaar
- [gmx-users] Trajectory Problem
Jian Zou
- [gmx-users] trjconv stops abruptly
Ashish Gupta
- [gmx-users] trjconv stops abruptly
Anton Feenstra
- [gmx-users] Using different versions of gromacs for a given simulation
sunita at chem.iitb.ac.in
- [gmx-users] Using different versions of gromacs for a given simulation
David van der Spoel
- [gmx-users] Using the double precision gromacs
itai bloch
- [gmx-users] Using the double precision gromacs
David
- [gmx-users] Using the double precision gromacs
Anton Feenstra
- [gmx-users] Vacuum Simulation
Joanne Hanna
- [gmx-users] Values for pairs, when attached to the topology...?
Maik Goette
- [gmx-users] Values for pairs, when attached to the topology...?
Berk Hess
- [gmx-users] Values for pairs, when attached to the topology...?
Maik Goette
- [gmx-users] Values for pairs, when attached to the topology...?
Berk Hess
- [gmx-users] VCM
Michal Kolinski
- [gmx-users] VCM
David van der Spoel
- [gmx-users] Velocity units
Jordi Camps
- [gmx-users] Velocity units
David
- [gmx-users] visualizing CONCOORD trayectory
Ruben Martinez-Buey
- [gmx-users] visualizing CONCOORD trayectory
Bert de Groot
- [gmx-users] visualizing CONCOORD trayectory
Nuno R. L. Ferreira
- [gmx-users] visualizing CONCOORD trayectory
Ran Friedman
- [gmx-users] visualizing CONCOORD trayectory
Maik Goette
- [gmx-users] visualizing CONCOORD trayectory
David van der Spoel
- [gmx-users] What's the best software to use: cut and past receptor and ligand
David
- [gmx-users] What's the best software to use: cut and past receptor and ligand
Kai Zhuang
- [gmx-users] Would you please help me with distribution function?
tetyana orynchak
- [gmx-users] Would you please help me with distribution function?
Anton Feenstra
- [gmx-users] writing a script to analyze gmx data (Jian Zou)
Kia Balali-Mood
- [gmx-users] writing script to analyze gmx data
Jian Zou
- [gmx-users] writing script to analyze gmx data
Zhiguo Liu
- [gmx-users] writing script to analyze gmx data
X.Periole
- [gmx-users] writing script to analyze gmx data
David van der Spoel
- [gmx-users] writing script to analyze gmx data
Jian Zou
- [gmx-users] zero temperature bug revisited when using frozen groups
ying-hua-chung at uiowa.edu
- [gmx-users] zinc fingers
Maximiliano Figueroa
- [gmx-users] zinc fingers
Maik Goette
Last message date:
Tue May 31 23:58:21 CEST 2005
Archived on: Thu Nov 14 12:01:40 CET 2013
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