[gmx-users] merge option in pdb2gmx
v.gogonea at csuohio.edu
Sun May 8 16:42:36 CEST 2005
I am trying to make a bridge between two peptide chains using the
specbond.dat file. It works only if the "merge" option in the pdb2gmx
is used, but in this case pdb2gmx creates a bond between the two
peptide chains which eliminates two of the chain termini (one from each
peptide). Is there a way to avoid this elimination of termini?
Thank you for your help.
More information about the gromacs.org_gmx-users