[gmx-users] (no subject)

[Anton Feenstra]

sridhar at cdfd.org.in wrote:

> Dear GMXUSERS,
> 
> g_rms has the option for generation of rmsd matrix file. Can anybody
> kindly explain over what atoms the rmsds in this matrix are calculated 
> ? Also is there any way to generate rmsd matrix with rmsds calculated for 
> selected index groups ? 

g_rms will ask you which groups you want to use for fitting and rmsd 
calculation.

-- 
Groetjes,

Anton

* NOTE: New Phone & Fax numbers (below) *

  _____________ _______________________________________________________
|             |                                                       |
|  _   _  ___,| K. Anton Feenstra                                     |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
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| \_/ \_/ | | | Tel: +31 20 59 87608 - Fax: +31 20 59 87610           |
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|             | "If You See Me Getting High, Knock Me Down" (RHCP)    |
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