[gmx-users] ED postional fluctuation

[Anton Feenstra]

Andrea Carotti wrote:

> Dear gmx-users,
> I'm performing an ED on my trajectory. I've seen in some work a plot 
> made with y= % of positional fluctuations an x= eigenvector index.
> Is there the possiblity to reproduce it with a gromacs tool? If yes, 
> wich are the steps to follow?

These are the normalized eigenvalues, found in 'eigenvalues.xvg'.

-- 
Groetjes,

Anton

* NOTE: New Phone & Fax numbers (below) *

  _____________ _______________________________________________________
|             |                                                       |
|  _   _  ___,| K. Anton Feenstra                                     |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
|(   |   )| | | De Boelelaan 1083 - 1081 HV Amsterdam - Netherlands   |
| \_/ \_/ | | | Tel: +31 20 59 87608 - Fax: +31 20 59 87610           |
|             | Feenstra at few.vu.nl - www.few.vu.nl/~feenstra/         |
|             | "If You See Me Getting High, Knock Me Down" (RHCP)    |
|_____________|_______________________________________________________|