[gmx-users] Plz suggest solution

David van der Spoel spoel at xray.bmc.uu.se
Fri Oct 28 13:10:48 CEST 2005


On Fri, 2005-10-28 at 06:47 +0000, Dhananjay chandrashekhar joshi wrote:
>   
> I am trying to install gromacs-3.3 on linux cluster havong 16 nodes.
> I was trying to install a parallel verson on single node. The steps
> which I have taken are as follows.
> 
> 1. lam 3.0.1 installed
> 
> 2. fftw-3.0.1 installed with doubled precision enabled.
>   The command that I typed is  ./configure --enable-threads
> --enable-sse2
>   The fftw successfully installed.
> 
> 3. Then I have untared the gromacs-3.3 and configured the gromacs.
>   the command that I typed is ./configure --enable-mpi
> --disable-float --enable-shared 
> 
> 4. After this I typed the command  make
> 
> and I got an error as follows 
> 
> mpicc: No such file or directory

mpicc is not in your path.

> make[4]: *** [libgmx_mpi_d.la] Error 1
> make[4]: Leaving directory
> `/usr/data/dhananjay/Dhananjay_installation/Gromacs/gromacs-3.3/src/gmxlib'
> make[3]: *** [all-recursive] Error 1
> make[3]: Leaving directory
> `/usr/data/dhananjay/Dhananjay_installation/Gromacs/gromacs-3.3/src/gmxlib'
> make[2]: *** [all-recursive] Error 1
> make[2]: Leaving directory
> `/usr/data/dhananjay/Dhananjay_installation/Gromacs/gromacs-3.3/src'
> make[1]: *** [all] Error 2
> make[1]: Leaving directory
> `/usr/data/dhananjay/Dhananjay_installation/Gromacs/gromacs-3.3/src'
> make: *** [all-recursive] Error 1
> 
> 
> 
> Anybody can tell me what is the problem ?
> 
> 
> 
> 
> 
> 
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,          75124 Uppsala, Sweden
phone:  46 18 471 4205          fax: 46 18 511 755
spoel at xray.bmc.uu.se    spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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