October 2005 Archives by subject
Starting: Sat Oct 1 00:25:36 CEST 2005
Ending: Mon Oct 31 20:38:01 CET 2005
Messages: 505
- [gmx-users] "manual" on lipid bilayer simulation
Arturas
- [gmx-users] "manual" on lipid bilayer simulation
paloureiro at biof.ufrj.br
- [gmx-users] "manual" on lipid bilayer simulation
Arturas
- [gmx-users] "manual" on lipid bilayer simulation
paloureiro at biof.ufrj.br
- [gmx-users] "manual" on lipid bilayer simulation
Hector Mtz-Seara
- [gmx-users] (no subject)
Fernando Mattio
- [gmx-users] (no subject)
elena.papaleo
- [gmx-users] (no subject)
Fernando Mattio
- [gmx-users] (no subject)
adelabra at post.tau.ac.il
- [gmx-users] (no subject)
leafyoung81-group at yahoo.com
- [gmx-users] (no subject)
Itamar Kass
- [gmx-users] (no subject)
adelabra at post.tau.ac.il
- [gmx-users] (no subject)
Fernando Mattio
- [gmx-users] (no subject)
leafyoung81-group at yahoo.com
- [gmx-users] (no subject)
Alan Dodd
- [gmx-users] (no subject)
zhengbs at jlu.edu.cn
- [gmx-users] (no subject)
zhengbs at jlu.edu.cn
- [gmx-users] 3.3 release and Forcefield nb.itp format
Yang Ye
- [gmx-users] 3.3 release and Forcefield nb.itp format
Erik Lindahl
- [gmx-users] 3.3 release and Forcefield nb.itp format
Yang Ye
- [gmx-users] 3.3 release and Forcefield nb.itp format
David
- [gmx-users] 3.3 release and Forcefield nb.itp format
Yang Ye
- [gmx-users] 3.3 release and Forcefield nb.itp format
Erik Lindahl
- [gmx-users] :a grompp problem using a ffamber port
sara pistolesi
- [gmx-users] :a grompp problem using a ffamber port
David Mobley
- [gmx-users] :a grompp problem using a ffamber port
Anton Feenstra
- [gmx-users] [Fwd: ala10]
David van der Spoel
- [gmx-users] [Fwd: Help with Gromacs.]
David van der Spoel
- [gmx-users] [Fwd: Help with Gromacs.]
Yang Ye
- [gmx-users] [Fwd: reflecting sphere]
David
- [gmx-users] a possible bug?
Jim (Rui) Qiao
- [gmx-users] a possible bug?
Erik Lindahl
- [gmx-users] a possible bug?
Erik Lindahl
- [gmx-users] A problem about genbox
zhengbs at jlu.edu.cn
- [gmx-users] A problem about genbox
Rahul Karyappa
- [gmx-users] about snapshot
aa qq
- [gmx-users] about snapshot
David van der Spoel
- [gmx-users] about the Umbrella input file!
nanyu101 at sina.com
- [gmx-users] adding parameters for surfactant in topology file
Rahul Karyappa
- [gmx-users] adding parameters for surfactant in topology file
Erik Lindahl
- [gmx-users] alkane interfaces
Jayant James Jayasundar
- [gmx-users] Ammonia-Water
Amol D. Atre
- [gmx-users] Ammonia-Water
David
- [gmx-users] an elastic network
David L. Bostick
- [gmx-users] an elastic network
David
- [gmx-users] an elastic network
David L. Bostick
- [gmx-users] an elastic network
David
- [gmx-users] Another questions about Encad inside GROMACS
Leonardo Sepulveda Durán
- [gmx-users] Another questions about Encad inside GROMACS
Erik Lindahl
- [gmx-users] ATP and ADP topologies for the OPLS force field
TJ Piggot
- [gmx-users] binutils
Gurpreet Singh
- [gmx-users] binutils
Erik Lindahl
- [gmx-users] Bob Arenburg/Austin/IBM is out of the office.
Bob Arenburg
- [gmx-users] box size problem
Rahul Karyappa
- [gmx-users] box size problem
David
- [gmx-users] box size problem
leafyoung81-group at yahoo.com
- [gmx-users] box size problem
leafyoung81-group at yahoo.com
- [gmx-users] Bug in free energy calculations in, heme-containing systems
David van der Spoel
- [gmx-users] Bug in free energy calculations in heme-containingsystems
Berk Hess
- [gmx-users] Bug in free energy calculations in heme-containingsystems
Erik Lindahl
- [gmx-users] Bug in free energy calculations in heme-containing systems
Chris Oostenbrink
- [gmx-users] Bug in free energy calculations in heme-containing systems
David
- [gmx-users] Bug in free energy calculations in, heme-containing systems
Chris Oostenbrink
- [gmx-users] buxfix incorporated?
David Mobley
- [gmx-users] charge in bilayers
Rama Gullapalli
- [gmx-users] charge in bilayers
David L. Bostick
- [gmx-users] charge in bilayers
Rama Gullapalli
- [gmx-users] charge in bilayers
David L. Bostick
- [gmx-users] charmm force field 27
Mu Yuguang (Dr)
- [gmx-users] CHARMM force field in gromacs
Claudio, Dr. Gil
- [gmx-users] ChelpG charge or MK charge?
Erik Lindahl
- [gmx-users] ChelpG charge or MK charge?
jztan at mail.shcnc.ac.cn
- [gmx-users] compilation problem on sdsc power4's
David Mobley
- [gmx-users] compilation problem on sdsc power4's
Yang Ye
- [gmx-users] compile problem gromacs 3.3
Mu Yuguang (Dr)
- [gmx-users] compile problem gromacs 3.3
Yang Ye
- [gmx-users] compile problem gromacs 3.3
Erik Lindahl
- [gmx-users] Compiling md_hole
Arturas
- [gmx-users] Compiling mdrun_make_hole: error
a3arzi at vaidila.vdu.lt
- [gmx-users] coverting traj fiel to movie file
Rahul Karyappa
- [gmx-users] coverting traj fiel to movie file
X.Periole
- [gmx-users] Defining planes with make_ndx - How?
Robson Honorato
- [gmx-users] Defining planes with make_ndx - How?
David
- [gmx-users] desorting
aneamtu at iasi.mednet.ro
- [gmx-users] desorting
leafyoung81-group at yahoo.com
- [gmx-users] re:re:desorting
aneamtu at iasi.mednet.ro
- [gmx-users] re:re:desorting
David van der Spoel
- [gmx-users] dielectric constant in reaction field (Gromacs3.3)
Maik Goette
- [gmx-users] dielectric constant in reaction field (Gromacs3.3)
David van der Spoel
- [gmx-users] dielectric constant in reaction field (Gromacs3.3)
Berk Hess
- [gmx-users] dielectric constant in reaction field (Gromacs3.3)
Maik Goette
- [gmx-users] Discrepancy between Free Energy Perturbation usingGromos96 and OPLS
Mu Yuguang (Dr)
- [gmx-users] Discrepancy between Free Energy Perturbation usingGromos96 and OPLS
Sandeep Somani
- [gmx-users] Discrepancy between Free Energy Perturbation usingGromos96 and OPLS
Sandeep Somani
- [gmx-users] Discrepancy between Free Energy Perturbation using Gromos96 and OPLS
Sandeep Somani
- [gmx-users] Discrepancy between Free Energy Perturbation using Gromos96 and OPLS
David
- [gmx-users] Discrepancy between Free Energy Perturbation using Gromos96 and OPLS
Maik Goette
- [gmx-users] Discrepancy between Free Energy Perturbation using Gromos96 and OPLS
Sandeep Somani
- [gmx-users] Discrepancy between Free Energy Perturbation using Gromos96 and OPLS
Erik Lindahl
- [gmx-users] Discrepancy between Free Energy Perturbation using Gromos96 and OPLS
Erik Lindahl
- [gmx-users] Discrepancy between Free Energy Perturbation using Gromos96 and OPLS
David
- [gmx-users] Discrepancy between Free Energy Perturbation using Gromos96 and OPLS
Erik Lindahl
- [gmx-users] Distance restraints
Bob Johnson
- [gmx-users] Distance restraints
David
- [gmx-users] Doubts about temperature
Fernando Mattio
- [gmx-users] Doubts about temperature
David van der Spoel
- [gmx-users] Re: dPCA
David
- [gmx-users] Re: dPCA
David
- [gmx-users] Re: dPCA
Mu Yuguang (Dr)
- [gmx-users] Re: dPCA
Gia Maisuradze
- [gmx-users] Re: dPCA
Mu Yuguang (Dr)
- [gmx-users] Re: dPCA
Gia Maisuradze
- [gmx-users] Re: dPCA
Gia Maisuradze
- [gmx-users] Re: dPCA
David van der Spoel
- [gmx-users] Re: dPCA
Gia Maisuradze
- [gmx-users] Re: dPCA
David van der Spoel
- [gmx-users] Re: dPCA
Gia Maisuradze
- [gmx-users] Re: dPCA
David
- [gmx-users] RE: dPCA
Mu Yuguang (Dr)
- [gmx-users] RE: dPCA
Gia Maisuradze
- [gmx-users] Dual core on Linux
Jim (Rui) Qiao
- [gmx-users] Dual core on Linux
leafyoung81-group at yahoo.com
- [gmx-users] Dual core on Linux
David
- [gmx-users] Editconf - creating .gro file from .pdb file
Fernando Mattio
- [gmx-users] Editconf - creating .gro file from .pdb file
David van der Spoel
- [gmx-users] Empty plot with g_density
David
- [gmx-users] Empty plot with g_density
Erik Lindahl
- [gmx-users] Energy conservation issue
Yujie Wu
- [gmx-users] Energy conservation issue
Berk Hess
- [gmx-users] Energy conservation issue
Yujie Wu
- [gmx-users] Energy conservation issue
Nguyen Hoang Phuong
- [gmx-users] Energy conservation issue
David van der Spoel
- [gmx-users] Energy conservation issue
Berk Hess
- [gmx-users] Energy conservation issue
Erik Lindahl
- [gmx-users] Energy conservation issue
Yang Ye
- [gmx-users] Energy conservation issue
Yujie Wu
- [gmx-users] Energy conservation issue
Erik Lindahl
- [gmx-users] Energy conservation issue
Berk Hess
- [gmx-users] energy of conformation change in water box
Samuel Flores
- [gmx-users] error in improper dihedral perturbation code
Chris Oostenbrink
- [gmx-users] error in improper dihedral perturbation code
Berk Hess
- [gmx-users] error on version3.3-rc3
Wang Zhun
- [gmx-users] error on version3.3-rc3
leafyoung81-group at yahoo.com
- [gmx-users] error on version3.3-rc3
Erik Lindahl
- [gmx-users] error on version3.3-rc3
Wang Zhun
- [gmx-users] error on version3.3-rc3
Pradip Kumar Biswas
- [gmx-users] Fatal Error
Amol D. Atre
- [gmx-users] Fatal Error
David
- [gmx-users] fatal error
lmao
- [gmx-users] fatal error
David
- [gmx-users] fatal error
lmao
- [gmx-users] fatal error
David
- [gmx-users] fatal error [using pdb2gmx]
Sven Huttenhouse
- [gmx-users] fatal error [using pdb2gmx]
Tsjerk Wassenaar
- [gmx-users] fatal error [using pdb2gmx]
Sven Huttenhouse
- [gmx-users] fatal error [using pdb2gmx]
David van der Spoel
- [gmx-users] fatal error [using pdb2gmx]
Sven Huttenhouse
- [gmx-users] fatal error [using pdb2gmx]
Erik Lindahl
- [gmx-users] fatal error [using pdb2gmx]
Sven Huttenhouse
- [gmx-users] fatal error [using pdb2gmx]
Erik Lindahl
- [gmx-users] fatal error [using pdb2gmx]
Sven Huttenhouse
- [gmx-users] fatal error [using pdb2gmx]
Erik Lindahl
- [gmx-users] fatal error [using pdb2gmx]
Tsjerk Wassenaar
- [gmx-users] fatal error [using pdb2gmx]
Sven Huttenhouse
- [gmx-users] fatal error [using pdb2gmx]
David
- [gmx-users] fatal error [using pdb2gmx]
Sven Huttenhouse
- [gmx-users] fatal error [using pdb2gmx]
Oliver Beckstein
- [gmx-users] fatal error [using pdb2gmx]
Dallas B. Warren
- [gmx-users] fatal error [using pdb2gmx]
Sven Huttenhouse
- [gmx-users] fatal error [using pdb2gmx]
David
- [gmx-users] fatal error [using pdb2gmx]
Sven Huttenhouse
- [gmx-users] fatal error [using pdb2gmx]
David
- [gmx-users] Fatal Error: 1 molecule of MeOH in 9 molecules of H2O
Amol D. Atre
- [gmx-users] Fatal Error: 1 molecule of MeOH in 9 molecules of H2O
Dallas B. Warren
- [gmx-users] Fatal Error: Atom Type
Amol D. Atre
- [gmx-users] Fatal Error: Atom Type
Yang Ye
- [gmx-users] Fatal error: Atomtype 'K' not found!
Lisong Mao
- [gmx-users] Fatal error: Atomtype 'K' not found!
Yang Ye
- [gmx-users] Fatal error: Atomtype 'K' not found!
Erik Lindahl
- [gmx-users] Fatal error: Atomtype 'K' not found!
lmao
- [gmx-users] Fatal error: Atomtype 'K' not found!
Erik Lindahl
- [gmx-users] Fatal error: Atomtype 'K' not found!
lmao
- [gmx-users] Fatal error: Bond atom type names can't be single digits
Erik Lindahl
- [gmx-users] Fatal error: Bond atom type names can't be single digits
David van der Spoel
- [gmx-users] Fatal error: Bond atom type names can't be single digits
Yang Ye
- [gmx-users] Fatal error: Bond atom type names can't be single digits
Naser, Md Abu
- [gmx-users] Fatal error: Bond atom type names can't be single digits
Fabrizio Mancinelli
- [gmx-users] Fatal Error: Water molecule
Amol D. Atre
- [gmx-users] Fatal Error: Water molecule
David
- [gmx-users] ffamber ports for 3.3.1
Eric J. Sorin
- [gmx-users] ffamber ports for 3.3.1
David Mobley
- [gmx-users] force field file
Dinesh Pinisetty
- [gmx-users] Fw: PME two Chain
Flavia Autore
- [gmx-users] Fwd:question on salt bridges
孔韧
- [gmx-users] Fwd:question on salt bridges
David
- [gmx-users] g_angle command output
Ester Chiessi
- [gmx-users] g_angle command output
David van der Spoel
- [gmx-users] g_angle command output
Ester Chiessi
- [gmx-users] g_angle command output
David van der Spoel
- [gmx-users] g_hbond
Isabella Daidone
- [gmx-users] g_hbond
Isabella Daidone
- [gmx-users] g_hbond
David van der Spoel
- [gmx-users] g_hbond
Isabella Daidone
- [gmx-users] g_hbond
Isabella Daidone
- [gmx-users] g_hbond
David
- [gmx-users] g_hbond
Isabella Daidone
- [gmx-users] g_RMS
Michal Kolinski
- [gmx-users] g_RMS
David
- [gmx-users] g_RMS
Michal Kolinski
- [gmx-users] g_RMS
David
- [gmx-users] GMX ligand topologies
Daan van Aalten
- [gmx-users] graphical user interface problem
yousef jamaali
- [gmx-users] graphical user interface problem
Oleg Ursu
- [gmx-users] Re: Gromacs 3.3 RC2
Gia Maisuradze
- [gmx-users] gromacs 3.3 user-defined potential functions
Nikolai Smolin
- [gmx-users] gromacs 3.3 user-defined potential functions
Paul van Maaren
- [gmx-users] Gromacs instalation on SGI fuel
naga raju
- [gmx-users] Gromacs-3.3 released
Erik Lindahl
- [gmx-users] Gromacs-3.3 released
Wenyu Zhong
- [gmx-users] Gromacs-3.3 released
Erik Lindahl
- [gmx-users] Gromacs-3.3 released
Wenyu Zhong
- [gmx-users] gromacs3.3 problem after installation
Erik Lindahl
- [gmx-users] gromacs3.3 problem after installation
Erik Lindahl
- [gmx-users] gromacs3.3 problem after installation
Wang Zhun
- [gmx-users] gromacs3.3 problem after installation
Wang Zhun
- [gmx-users] gromacs3.3 problem after installation
Erik Lindahl
- [gmx-users] grompp error
Ken Rotondi
- [gmx-users] grompp error
Erik Lindahl
- [gmx-users] grompp error
Viswanadham Sridhara
- [gmx-users] grompp error
Erik Lindahl
- [gmx-users] grompp error with gromacs-3.3
Lei Zhou
- [gmx-users] grompp error with gromacs-3.3
David
- [gmx-users] grompp error with gromacs-3.3
Erik Lindahl
- [gmx-users] grompp error with gromacs-3.3
Lei Zhou
- [gmx-users] grompp error with gromacs-3.3
Erik Lindahl
- [gmx-users] grompp error with gromacs-3.3
Pim Schravendijk
- [gmx-users] grompp error with gromacs-3.3
Pim Schravendijk
- [gmx-users] help and a tutorial
Sebastien Gerega
- [gmx-users] help and a tutorial
Erik Lindahl
- [gmx-users] help and a tutorial
Tsjerk Wassenaar
- [gmx-users] help and a tutorial
Sebastien Gerega
- [gmx-users] help and a tutorial
Tsjerk Wassenaar
- [gmx-users] help and a tutorial
Sebastien Gerega
- [gmx-users] help and a tutorial
Erik Lindahl
- [gmx-users] help me with g_rmsf...
mekanix
- [gmx-users] help me with g_rmsf...
Tsjerk Wassenaar
- [gmx-users] help me with g_rmsf...
mekanix
- [gmx-users] Re: help me with g_rmsf...
mekanix
- [gmx-users] Re: help me with g_rmsf...
Tsjerk Wassenaar
- [gmx-users] Re: help me with g_rmsf...
mekanix
- [gmx-users] Hessian matrix
Nguyen Hoang Phuong
- [gmx-users] Hessian matrix
Erik Lindahl
- [gmx-users] Hessian matrix
Nguyen Hoang Phuong
- [gmx-users] Hessian matrix
Erik Lindahl
- [gmx-users] Hessian matrix
Nguyen Hoang Phuong
- [gmx-users] How many processors do I need?...
Brian Wengerter
- [gmx-users] How many processors do I need?...
Dallas B. Warren
- [gmx-users] How many processors do I need?...
Mark Abraham
- [gmx-users] how to create a dummy atom in the oplsaa force field?
nanyu101 at sina.com
- [gmx-users] how to create a dummy atom in the oplsaa force field?
nanyu101 at sina.com
- [gmx-users] how to create a dummy atom in the oplsaa force field?
leafyoung81-group at yahoo.com
- [gmx-users] how to create a dummy atom in the oplsaa force field?
Yang Ye
- [gmx-users] How to increase (like x2) interactions
Diego Enry
- [gmx-users] How to increase (like x2) interactions
David van der Spoel
- [gmx-users] Ice box
Fernando Mattio
- [gmx-users] Ice box
Mark Abraham
- [gmx-users] Ice box
David
- [gmx-users] Ice box
Erik Lindahl
- [gmx-users] Ice box
Fernando Mattio
- [gmx-users] Ice box
Erik Lindahl
- [gmx-users] Ice box
David van der Spoel
- [gmx-users] Ice box
Fernando Mattio
- [gmx-users] Ice box
David van der Spoel
- [gmx-users] Increasing system size
Viswanadham Sridhara
- [gmx-users] Increasing system size
Dallas B. Warren
- [gmx-users] Increasing system size
Viswanadham Sridhara
- [gmx-users] install single & double precision versions of fftw-3.0.1
David van der Spoel
- [gmx-users] install single & double precision versions of fftw-3.0.1
Jian Zou
- [gmx-users] install single & double precision versions of fftw-3.0.1
Erik Lindahl
- [gmx-users] install single & double precision versions of fftw-3.0.1
Jian Zou
- [gmx-users] install single & double precision versions of fftw-3.0.1
Erik Lindahl
- [gmx-users] install single & double precision versions of fftw-3.0.1
Jian Zou
- [gmx-users] installing GROMACS3.3 using RPM packages for Linux
lsettimo at abo.fi
- [gmx-users] Re: installing GROMACS3.3 using RPM packages for Linux
lsettimo at abo.fi
- [gmx-users] Re: installing GROMACS3.3 using RPM packages for Linux
Erik Lindahl
- [gmx-users] itp file for six-site model of water
Fernando Mattio
- [gmx-users] itp file for six-site model of water
Erik Lindahl
- [gmx-users] itp file for six-site model of water
Paul van Maaren
- [gmx-users] itp file for six-site model of water
Fernando Mattio
- [gmx-users] Large VCM and mdrun crashed
leafyoung81-group at yahoo.com
- [gmx-users] Large VCM and mdrun crashed
David
- [gmx-users] Large VCM and mdrun crashed
Tsjerk Wassenaar
- [gmx-users] Large VCM and mdrun crashed
Yinghong
- [gmx-users] Large VCM on athlon processor
Viswanadham Sridhara
- [gmx-users] lie with 20 A water shell
t.orban+csuohio.edu at sims.csuohio.edu
- [gmx-users] LIE with a 20 A water shell
tivi
- [gmx-users] LIE with a 20 A water shell
David van der Spoel
- [gmx-users] Ligand bond
abelius
- [gmx-users] Ligand bond
David Mobley
- [gmx-users] Ligand bond
abelius
- [gmx-users] Ligand bond
Andrea Carotti
- [gmx-users] Ligand bond
Tsjerk Wassenaar
- [gmx-users] Ligand bond
abelius
- [gmx-users] Ligand bond
Andrea Carotti
- [gmx-users] Ligand bond
abelius
- [gmx-users] Ligand bond
Andrea Carotti
- [gmx-users] ligand topology problem in 3.3
Luca Mollica
- [gmx-users] ligand topology problem in 3.3 (problems in delivering this mail)
Erik Lindahl
- [gmx-users] ligand topology problem in 3.3 (problems in delivering this mail)
Luca Mollica
- [gmx-users] LINCS error with 3.3
Yang Ye
- [gmx-users] LINCS error with 3.3
David van der Spoel
- [gmx-users] LINCS error with 3.3
Yang Ye
- [gmx-users] LINCS error with 3.3
David
- [gmx-users] LINCS error with 3.3
Yang Ye
- [gmx-users] Long range forces, periodic boundaries and aggregation
Dallas B. Warren
- [gmx-users] MD error: ci ?
Wang Zhun
- [gmx-users] mdrun -rerun results depend on starting .gro file. Why?
David
- [gmx-users] mdrun -rerun results depend on starting .gro file. Why?
David Mobley
- [gmx-users] mdrun -rerun results depend on starting .gro file. Why?
David
- [gmx-users] mdrun -rerun results depend on starting .gro file. Why?
David Mobley
- [gmx-users] mdrun -rerun results depend on starting .gro file. Why?
David
- [gmx-users] mdrun -rerun results depend on starting .gro file. Why?
David Mobley
- [gmx-users] mdrun -rerun results depend on starting .gro file. Why?
David Mobley
- [gmx-users] mdrun -rerun results depend on starting .gro file. Why?
David
- [gmx-users] mdrun -rerun results depend on starting .gro file. Why?
David Mobley
- [gmx-users] Re: Mdrun interrupted using a triclinc box
Tsjerk Wassenaar
- [gmx-users] Mdrun interrupted using a triclinc box
Yang Ye
- [gmx-users] Mdrun interrupted using a triclinc box
Yinghong
- [gmx-users] Re: Mdrun interrupted using a triclinc box
leafyoung81-group at yahoo.com
- [gmx-users] Re: Mdrun interrupted using a triclinc box
Tsjerk Wassenaar
- [gmx-users] Re: Mdrun interrupted using a triclinc box
Yinghong
- [gmx-users] Merging two topology files
Naser, Md Abu
- [gmx-users] Merging two topology files
David
- [gmx-users] Merging two topology files
Naser, Md Abu
- [gmx-users] Merging two topology files
David van der Spoel
- [gmx-users] Merging two topology files
Yang Ye
- [gmx-users] MPICH on Gbit with > 4 CPUs?
Carsten Kutzner
- [gmx-users] MPICH on Gbit with > 4 CPUs?
Pim Schravendijk
- [gmx-users] Re: MPICH on Gbit with > 4 CPUs?
Justin MacCallum
- [gmx-users] Re: MPICH on Gbit with > 4 CPUs?
David
- [gmx-users] mpich/share/machines file for dual processor machine
Jeroen Mesters
- [gmx-users] Need help with fix for multiple pull groups
YOLANDA SMALL
- [gmx-users] ngmx and X11
Wang Zhun
- [gmx-users] ngmx and X11
leafyoung81-group at yahoo.com
- [gmx-users] ngmx and X11
David van der Spoel
- [gmx-users] ngmx and X11
Naser, Md Abu
- [gmx-users] Normal Modes Analysis
Fabrizio Mancinelli
- [gmx-users] Normal Modes Analysis
Bert de Groot
- [gmx-users] Normal Modes Analysis
Erik Lindahl
- [gmx-users] Nterm acetyl cap
deepa rajamani
- [gmx-users] Nterm acetyl cap
David
- [gmx-users] OPLS topology and parameter files for ALF4-
Marta Filizola
- [gmx-users] OPLSaa Force Field
Arlan S.Gonçalves
- [gmx-users] OPLSaa Force Field
Maik Goette
- [gmx-users] OPLSAANR RNA problems
Ken Rotondi
- [gmx-users] OPLSAANR RNA problems
David
- [gmx-users] Re: OPLSAANR RNA problems
Andrey V. Golovin
- [gmx-users] Re: OPLSAANR RNA problems
David
- [gmx-users] Re: OPLSAANR RNA problems
Andrey V. Golovin
- [gmx-users] Parameter file
Fernando Mattio
- [gmx-users] Parameter file
MGiò
- [gmx-users] Parameter file
Tsjerk Wassenaar
- [gmx-users] Parameter file - dt and nsteps
Fernando Mattio
- [gmx-users] Parameter file - dt and nsteps
Alan Dodd
- [gmx-users] pdb file from last frame of mdrun?
Samuel Flores
- [gmx-users] pdb file from last frame of mdrun?
Rama Gullapalli
- [gmx-users] pgcc problems in compile fftw
Mu Yuguang (Dr)
- [gmx-users] pgcc problems in compile fftw
David
- [gmx-users] pgcc problems in compile fftw
Mu Yuguang (Dr)
- [gmx-users] pgcc problems in compile fftw
David
- [gmx-users] Plz suggest solution
Dhananjay chandrashekhar joshi
- [gmx-users] Plz suggest solution
Dhananjay chandrashekhar joshi
- [gmx-users] Plz suggest solution
Mark Abraham
- [gmx-users] Plz suggest solution
David van der Spoel
- [gmx-users] POSRES
Alberto Malvezzi
- [gmx-users] POSRES
David van der Spoel
- [gmx-users] preparation for make_hole (?)
Arturas
- [gmx-users] principal component and essential dynamics analysis
Prof. Y. U. Sasidhar
- [gmx-users] principal component and essential dynamics analysis
Nuno R. L. Ferreira
- [gmx-users] principal component and essential dynamics analysis
MGiò
- [gmx-users] principal component and essential dynamics analysis
Ruben Martinez-Buey
- [gmx-users] principal component and essential dynamics analysis
Nuno R. L. Ferreira
- [gmx-users] principal component and essential dynamics analysis
Prof. Y. U. Sasidhar
- [gmx-users] problem facing after continuing the trajectory
Rahul Karyappa
- [gmx-users] problem facing after continuing the trajectory
David
- [gmx-users] Problem in installing gromacs in sgi irix6.5
naga raju
- [gmx-users] Problem in installing gromacs in sgi irix6.5
Erik Lindahl
- [gmx-users] Problem in mdrun_mpi using MPICH
Alok
- [gmx-users] Problem in mdrun_mpi using MPICH
David van der Spoel
- [gmx-users] Problem in mdrun_mpi using MPICH
Alok
- [gmx-users] Problem in mdrun_mpi using MPICH
David van der Spoel
- [gmx-users] Problem in mdrun_mpi using MPICH
Erik Lindahl
- [gmx-users] Problem in mdrun_mpi using MPICH
Alok
- [gmx-users] Problem in mdrun_mpi using MPICH
Erik Lindahl
- [gmx-users] problem using genbox
Abdullah Taher Mohammed Nasr
- [gmx-users] problem using genbox
David
- [gmx-users] Problem with encad in pdb2gmx, GMX 3.3 CVS version
Leonardo Sepulveda Durán
- [gmx-users] Problem with encad in pdb2gmx, GMX 3.3 CVS version
David van der Spoel
- [gmx-users] problems in the topology of nucleotides using ffG43a2.rtp
Paulo Netz
- [gmx-users] Prodrg
Rodrigo Reston
- [gmx-users] Prodrg
David
- [gmx-users] Prodrg
Daan van Aalten
- [gmx-users] Prodrg
Rodrigo Reston
- [gmx-users] Prodrg
David
- [gmx-users] Prodrg
Rodrigo Reston
- [gmx-users] Prodrg
David
- [gmx-users] prodrg on small molecule
jztan at mail.shcnc.ac.cn
- [gmx-users] Re: prodrg on small molecule
jztan at mail.shcnc.ac.cn
- [gmx-users] Re: prodrg on small molecule
Pim Schravendijk
- [gmx-users] Re: prodrg on small molecule
Dallas B. Warren
- [gmx-users] pull code
arnab mukherjee
- [gmx-users] question about PRODRG
jztan at mail.shcnc.ac.cn
- [gmx-users] Question about creating new forcefield terms
Suchitra Konduri
- [gmx-users] Question about creating new forcefield terms
David
- [gmx-users] Question about creating new forcefield terms
Suchitra Konduri
- [gmx-users] question on Cholesterol topology file
Jim (Rui) Qiao
- [gmx-users] question on Cholesterol topology file
Erik Lindahl
- [gmx-users] reference on free energy with soft core electrostaticsand PME?
Berk Hess
- [gmx-users] reference on free energy with soft core electrostatics and PME?
David Mobley
- [gmx-users] Re: reflecting sphere
Pim Schravendijk
- [gmx-users] Re: reflecting sphere
Pim Schravendijk
- [gmx-users] Re: REMD ... again a problem with analysis (on the fly)
X.Periole
- [gmx-users] Re: REMD ... again a problem with analysis (on the fly)
David van der Spoel
- [gmx-users] Re: REMD ... again a problem with analysis (on the fly)
Berk Hess
- [gmx-users] REMD ... again a problem with analysis (on the fly)
mollica.luca at hsr.it
- [gmx-users] REMD ... again a problem with analysis (on the fly)
X.Periole
- [gmx-users] REMD ... again a problem with analysis (on the fly)
Berk Hess
- [gmx-users] Re: REMD ... again a problem with analysis (on the fly)
Luca Mollica
- [gmx-users] REMD, broken simulations and analysis
Luca Mollica
- [gmx-users] REMD, broken simulations and analysis
Xavier Periole
- [gmx-users] REMD, broken simulations and analysis
Berk Hess
- [gmx-users] Removal of Hydrogen atoms from the molecule??
Amol D. Atre
- [gmx-users] Removal of Hydrogen atoms from the molecule??
Fernando Mattio
- [gmx-users] Replica exchange questions
Marc Baaden
- [gmx-users] Replica exchange questions
Xavier Periole
- [gmx-users] Replica exchange questions
David van der Spoel
- [gmx-users] Replica exchange questions
Moore, Jonathan (J)
- [gmx-users] simple stuff!
Ria Sookram
- [gmx-users] simple stuff!
nancy gerits
- [gmx-users] Simulated annealing MD
chandran karunakaran
- [gmx-users] Re: simulation of water near hydrophilic surface with gromacs
David van der Spoel
- [gmx-users] solvate protein in water?
Zhen Qin
- [gmx-users] solvate protein in water?
Tsjerk Wassenaar
- [gmx-users] some remarks about REMD and analysis
Luca Mollica
- [gmx-users] some remarks about REMD and analysis
David
- [gmx-users] SS from xpm file
Nguyen Hoang Phuong
- [gmx-users] SS from xpm file
Mu Yuguang (Dr)
- [gmx-users] SS from xpm file
David van der Spoel
- [gmx-users] SS from xpm file
Nguyen Hoang Phuong
- [gmx-users] SS from xpm file
Xavier Periole
- [gmx-users] Steered MD
chandran karunakaran
- [gmx-users] Steered MD
Rodrigo Reston
- [gmx-users] stripping water
Ken Rotondi
- [gmx-users] Supradiffusivity in a bilayer
Rama Gullapalli
- [gmx-users] Supradiffusivity in a bilayer
Erik Lindahl
- [gmx-users] Supradiffusivity in a bilayer
Rama Gullapalli
- [gmx-users] template.c
Sukit Leekumjorn
- [gmx-users] template.c
Erik Lindahl
- [gmx-users] testing ligand-protein system in Release Candidate 3 of version 3.3
David
- [gmx-users] testing ligand-protein system in Release Candidate 3 of version 3.3
mollica.luca at hsr.it
- [gmx-users] The difference for 1-4 interaction between FF Gromos87 and Gromos96
Tanping Li
- [gmx-users] The energy conservation of NVE system in Gromos96
Nguyen Hoang Phuong
- [gmx-users] The energy conservation of NVE system in Gromos96
Tanping Li
- [gmx-users] The energy conservation of NVE system in Gromos96
David
- [gmx-users] To remove rot+trans from the trajectory
sunita at chem.iitb.ac.in
- [gmx-users] To remove rot+trans from the trajectory
David
- [gmx-users] Topology file for diamond nanocrystal in water
Гена Ионов
- [gmx-users] Topology file for diamond nanocrystal in water
David
- [gmx-users] topology file for thermodynamic integration
Hiromichi Tsurui
- [gmx-users] topology file for thermodynamic integration
Maik Goette
- [gmx-users] topology file for thermodynamic integration
Hiromichi Tsurui
- [gmx-users] trjconv and trjcat
fsaadedi at staffmail.ed.ac.uk
- [gmx-users] trjconv and trjcat
leafyoung81-group at yahoo.com
- [gmx-users] Trouble using Encad in gmx-3.3
Leonardo Sepulveda Durán
- [gmx-users] Trouble using Encad in gmx-3.3
Erik Lindahl
- [gmx-users] umbrella failed
nanyu101 at sina.com
- [gmx-users] Using a rtp file for sugar
Fernando Mattio
- [gmx-users] Using a rtp file for sugar
Tsjerk Wassenaar
- [gmx-users] Using a rtp file for sugar
Fernando Mattio
- [gmx-users] Using a rtp file for sugar
Fernando Mattio
- [gmx-users] Using a rtp file for sugar
David
- [gmx-users] Using a rtp file for sugar
Tsjerk Wassenaar
- [gmx-users] using g87 (converted from ambconv) in g_density
Hwankyu Lee
- [gmx-users] using genbox
Abdullah Taher Mohammed Nasr
- [gmx-users] validation of g_hbond
Moore, Jonathan (J)
- [gmx-users] validation of g_hbond
David
- [gmx-users] Visualize tric box in vmd
Michal Kolinski
- [gmx-users] Warning/hint about Gromacs-3.3 installation
Erik Lindahl
- [gmx-users] Water positions
Euzebio Guimarães Barbosa
- [gmx-users] Water positions
X.Periole
- [gmx-users] what\'s wrong with my dummy atom definition?
nanyu101 at sina.com
- [gmx-users] what\'s wrong with my dummy atom definition?
leafyoung81-group at yahoo.com
- [gmx-users] what\'s wrong with my dummy atom definition?
nanyu101 at sina.com
- [gmx-users] Where can i find the test cases for gromacs and such.
Kai Zhuang
- [gmx-users] Where can i find the test cases for gromacs and such.
David van der Spoel
- [gmx-users] Which kind of box?
Rodrigo Reston
- [gmx-users] Which kind of box?
Tsjerk Wassenaar
- [gmx-users] Which kind of box?
Yinghong
- [gmx-users] Re:Which kind of box?
Tsjerk Wassenaar
- [gmx-users] Re: Re:Which kind of box?
Tsjerk Wassenaar
- [gmx-users] Re: Re:Which kind of box?
Tsjerk Wassenaar
- [gmx-users] Re:Which kind of box?
Yinghong
- [gmx-users] Re: Re:Which kind of box?
Yinghong
- [gmx-users] Re: Re:Which kind of box?
Yinghong
- [gmx-users] Re: Re:Which kind of box?
Tsjerk Wassenaar
Last message date:
Mon Oct 31 20:38:01 CET 2005
Archived on: Thu Nov 14 12:02:22 CET 2013
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