[gmx-users] Trajectory Analysis!

[chiloo Laohpongspaisan]

Dear All,
 
If i'd like to investigate the distance between 2 atoms of the system (protein/bilayer/water), is the command "g_bond"? And are there any options that must be added to focus only two atoms.
And If i'd like to investigate the movement of one water molecule, how is the command?
 
Best regards,
chiloo
 
 
 

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