[gmx-users] Re: orientation of helical peptide (Dilraj Lama)

[Santi Esteban Martin]

Hi Dilraj Lama,

You can also take a look at
 
http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/orient/

> Dilraj Lama wrote:
> > hello gmx-users,
> >                 I have two helical peptide of 16 residues each.I
want to orient these peptides
> > parallel to each other in one case and perpendicular to one
another in another.How
> > can I do this using Gromacs?
> > 
> > Please suggest.
> > 
> > Thank you.
> 

Enjoy

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