[gmx-users] MD run with position restraints

[leafyoung81-group at yahoo.com]

--- Gia Maisuradze <gia at chem.unr.edu> wrote:

> Hi,
> 
> I am going to run long MD simulation (100ns).
> According to manuel first I 
> should run MD with position restraints and then full
> MD run without 
> restraints. I was wondering how many nanosecond MD
> run with restraints I 
> should perform in my case.
http://indigo1.biop.ox.ac.uk/MD_workshops/equilibrium.pdf
> 
> Thanks in advance,
> 
> Gia Maisuradze
> 
> 
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