[gmx-users] User defined potential functions.
Anton Feenstra
feenstra at few.vu.nl
Fri Sep 30 15:13:12 CEST 2005
Omololu Akin-Ojo wrote:
> Hi All,
>
> i would like to use a different set of potenital
> functions. The functions are *not* Lennard Jones type
> or any of the 6-n potentials but they have damped
> long-range for example, -C6*d(b*r)/r^6, where the
> damping parameter (b) is different for different atom
> pairs.
>
> I have read the relevant section of the manual and it
> only allows for different coefficients (C6 or C12 or
> ...) but does not treat a case like this. Is there any
> way i could handle my case?
Yes, if you don't need the L-J potential (at all), you can use the 'user
tables' option. Search the manual and/or maillist for instructions.
--
Groetjes,
Anton
* NOTE: New Affiliation, Phone & Fax numbers (below) *
_____________ _______________________________________________________
| | |
| _ _ ___,| K. Anton Feenstra |
| / \ / \'| | | IBIVU/Bioinformatics - Vrije Universiteit Amsterdam |
|( | )| | | De Boelelaan 1083 - 1081A HV Amsterdam - Netherlands |
| \_/ \_/ | | | Tel +31 20 59 87783 - Fax +31 20 59 87653 - Room P440 |
| | Feenstra at few.vu.nl - www.few.vu.nl/~feenstra/ |
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