[gmx-users] segnentation fault in drug_enzyme_tutorial

David van der Spoel spoel at xray.bmc.uu.se
Fri Dec 22 22:35:13 CET 2006


Robert Kretschmer wrote:
> Dear all,
>  
> I'm new at gromacs. I try to do the Drug Enzyme tutorial on Suse Linux 
> 10.0 (AMD Athlon 1900+) and Gromacs 3.3.1. Fftw3 is also installed!
> Everything is Ok until this command: *nohup mdrun –s *trp_md.tpr *–o 
> *trp_md.trr *–c *trp_pmd.pdb *–g *md.log *–e *md.edr *&*
>  
> That ends abnormally with a segementation fault. I find in the 
> mailinglist a problem witch look like my problem, but it isn't.
>  
> can anybody help me

how about the other gromacs tutorials?
if nothing works it most likely is an installation problem. otherwise it 
could be anything in your input.

-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
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