[gmx-users] Simulating a peptide

[raja]

Dear all,
      I want to simulate a peptide of 10 residues length small part of a
      protein of my interest), to see its secondary structure variation
      upon mutation. Is it enough to simulate that 10 residues  alone to
      see the change or is it mandatory to put entire protein and to
      seek for posible way to constraint other uninterested region.

With Thanks !

B.Nataraj

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  raja
  raja_28 at fastmail.us

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