[gmx-users] how to skip corrupt frames in trr-file?

[Alexandra Patriksson]

Hej,

I have a trajectory file with an incomplete frame in the beginning. I am 
only interested in the final ns of the trajectory but can not do any of 
the analyses that I want to do just because of this corrupt frame in the 
beginning - the programs stops. Neither can I make a new trajectory of 
the final ns using trjconv, because trjconv also stops at the broken 
frame. Is there any way for me  to get around this? I have also tried 
the linux command split but it didn't give me any useful data.

Thanks in advance
Alexandra