[gmx-users] PME scaling
David van der Spoel
spoel at xray.bmc.uu.se
Tue Jan 10 22:53:52 CET 2006
Erik Lindahl wrote:
> Hi,
>
> On Jan 10, 2006, at 7:41 PM, David van der Spoel wrote:
>
>>
>> In addition to Erik's answer: can you be more specific? We've seen
>> quite decent scaling on up to 16 processors, but depending strongly
>> on the size of the system and the interconnect.
>
>
> David, if you're thinking of Carsten's PME modifications I believe we
> only added those in the head branch and not 3.3.
That's correct, but Jacob changes are in 3.3
>
> Cheers,
>
> Erik
>
>
> -----------------------------------------------------------
> Erik Lindahl <lindahl at sbc.su.se> Backup address:
> <erik.lindahl at gmail.com>
> Assistant Professor, Computational Structural Biology
> Stockholm Bioinformatics Center, Stockholm University, SE 106 91 Stockholm
> Phone: +46 8 5537 8564 Fax: +46 8 5537 8214
>
>
>
>
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--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://xray.bmc.uu.se/~spoel
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