[gmx-users] Automating g_dist

David Mobley dmobley at gmail.com
Thu Jul 13 18:44:48 CEST 2006

"echo 1 2 | g_dist" or some such.


On 7/13/06, Javad Azadi <jazadi at chemistry.ohio-state.edu> wrote:
> Hey!
> So I have found an effective method of measuring the distances between atoms, and I am wondering if
> there is a method of using g_dist without user interaction.  My ultimate goal is to write a script to
> analyze about 50 trajectories and to do it on a remote system, without manually doing each one.  I have
> the two atoms and two groups in their respective ndx files, but even with just two points it still asks me
> for which two groups I'd like to measure.
> Thanks,
> Javad Azadi
> Undergraduate Researcher
> The Ohio State University
> jazadi at chemistry.osu.edu
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