[gmx-users] REMD question

[David van der Spoel]

Joohyun Kim wrote:
> Dear All,
> 
> How trajectories are generated with REMD option?  I have 16 replicas and 
> am having 16 trajectories.  In each trajectory, temperature is same?  
> Then, how can I look at the temperature variation according to exchanges?

you will have to write a script to do that based on the output in the 
md0.log file.
> 
> 
> Joohyun  
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
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