[gmx-users] header of xvg file from GMX Analysis Tools

Erik Marklund erikm at xray.bmc.uu.se
Wed Jun 28 13:08:35 CEST 2006


Or simply use grep. The header lines all begin with strange characters I
think (@ and #), while the data lines begin with something like:

 '^[[:space:]][[:space:]]*[0-9]'

It should be quite easy to script.

/Erik

On Tue, 2006-06-27 at 20:58 -0700, Arneh Babakhani wrote:
> Thanks, I'll give it a shot . . .
> 
> Arneh
> 
> Mark Abraham wrote:
> > Arneh Babakhani wrote:
> >> Sure . . . was just wondering if I could do it with an option in GMX 
> >> . . . would be a lot easier to implement in the analysis scripts that 
> >> I already have.
> >
> > Well I've never used Matlab, but I Googled "matlab reading files" and 
> > the first hit tells me that the textread() function has the ability to 
> > ignore some number of header lines that the user specifies. This seems 
> > to do your job.
> >
> > Mark
> > _______________________________________________
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-- 
Erik Marklund, PhD Student, Molecular Biopcysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
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phone:  46 18 471 4537          fax: 46 18 511 755
erikm at xray.bmc.uu.se




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