[gmx-users] POPC simulation

Arindam Ganguly arindamganguly at gmail.com
Wed May 24 19:02:43 CEST 2006

Hi Steffen,
thanks for the reply. this is what i have done. my topol.top looks
like this now
#inlcude ffgmx.itp
inlcude popc.itp.

as per your last reply i have copied the contents of lipid.itp to
ffgmxbon.itp and ffgmxnb.itp without removing the contents of the
respective file. basically just appended the files with the contents
of the lipid.itp .

now when i run grommp -v - -f em.mdp ,
it still says atom type "LC3" not found,.

i can't understand why this mistake in fact taking place. popc.itp
file the first 3 lines after [atom]
in fact mentions LC3. so where is the mistake. plx help. thanks.

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