[gmx-users] PDB2GMX PROBLEM: *** buffer overflow detected ***: pdb2gmx terminated

Anthony Cruz acb15885 at uprm.edu
Thu May 25 18:50:34 CEST 2006


Hi:
I want to run a simulation of a heme protein. I found that in the gromacs site 
the bug in the specbond.c and I download this file from bugzilla. I 
substitute this file in the source and try to build a new rpm to install. 
When I instal the new rpm and try to use pdb2gmx the progam stop with the 
followin error:

:-)  G  R  O  M  A  C  S  (-:

*** buffer overflow detected ***: pdb2gmx terminated
Aborted

How I could fix that???

Thanks 

Anthony



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