[gmx-users] topology format appears wrong
Gavin Seddon
gavin.m.seddon at manchester.ac.uk
Fri Oct 6 04:38:57 CEST 2006
Hi,
I am investigating glutathione s-transferase however, the GTT residue
isn't in the topology database. So I extracted the co-ords. from my pdb
and input into prodrg and inserted the topology into the correct force
field file.
When I run pdb2gmx I receive
'
Fatal error:
in .rtp file in residue GTT at line:
1 OM 1 GTT O11 1 -0.225 15.9994'
After checking the other ff entries I see my format is wrong. How shall
I correct this?
Thanks.
Gavin
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