[gmx-users] Co-variance Analysis

N.Goga N.Goga at rug.nl
Tue Sep 19 16:35:08 CEST 2006


Hi Tsjerk,

  thank you for your help for the generation of the files. 
I found them. Please can you help me with some litle bit 
more information.

  1) How many atoms did you used ?(it seems 1894 looking 
to the nr. of lines of the masses)
  2) Are just normal masses or did you compute 
(mass_particle)^(1/2)
  3) How many frames of the positions the particles are 
used?
  4) How many eigenvalues in average are needed (the order 
of magnitude) for such a co-variance computation?

  Thank you in advance for your answer.

  Best regards
   Nicu




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