[gmx-users] A very Basic query

Mark Abraham Mark.Abraham at anu.edu.au
Thu Aug 23 01:35:57 CEST 2007


Curiously enough, this is the very first FAQ in the wiki list...
http://wiki.gromacs.org/index.php/FAQs

Mark

Venky Krishna wrote:
> well I don't know if it can be done with gromacs... but sure can be 
> using shell script + perl script.
> do something like this....
> 
> #!/usr/bin/perl
>  while ($i<10)
>  {
>          system ("g_dist << EOF
>           13
>           14
>           EOF");
>           $i=$i+1;
>   }
> 
> Venky
> 
> On Aug 22, 2007, at 7:44 AM, priyanka srivastava wrote:
> 
>> Dear All,
>>
>> Apologies for a very basic query.
>>
>> I wish to run g_dist command using groups 13 & 14 say
>> 10 times, when I write the perl script it prompts me
>> at the following point 10 times:
>>
>> Select a group:
>>
>> So I have to manually give 13 and 14 each time.
>>
>> Is there anyway in gromacs to automate it??
>>
>> Priyanka.
>>
>>
>>
>>
>>
>>
>>
>>
>>
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> 
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