[gmx-users] A very Basic query

priyanka srivastava priyankaps4 at yahoo.com
Thu Aug 23 07:35:17 CEST 2007


Dear Dr. Mark,

My sincere apologies for posting the question without
searching for it. 

Regards,
Priyanka

--- Mark Abraham <Mark.Abraham at anu.edu.au> wrote:

> Curiously enough, this is the very first FAQ in the
> wiki list...
> http://wiki.gromacs.org/index.php/FAQs
> 
> Mark
> 
> Venky Krishna wrote:
> > well I don't know if it can be done with
> gromacs... but sure can be 
> > using shell script + perl script.
> > do something like this....
> > 
> > #!/usr/bin/perl
> >  while ($i<10)
> >  {
> >          system ("g_dist << EOF
> >           13
> >           14
> >           EOF");
> >           $i=$i+1;
> >   }
> > 
> > Venky
> > 
> > On Aug 22, 2007, at 7:44 AM, priyanka srivastava
> wrote:
> > 
> >> Dear All,
> >>
> >> Apologies for a very basic query.
> >>
> >> I wish to run g_dist command using groups 13 & 14
> say
> >> 10 times, when I write the perl script it prompts
> me
> >> at the following point 10 times:
> >>
> >> Select a group:
> >>
> >> So I have to manually give 13 and 14 each time.
> >>
> >> Is there anyway in gromacs to automate it??
> >>
> >> Priyanka.
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >>
>
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> 
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