[gmx-users] insert protein in membrane again

pragya chohan pragyachohan at hotmail.com
Wed Dec 19 08:06:29 CET 2007



Did u match their box size before doing the genbox?
You could also get this error if you manually deleted that residue(s) from your gro file.
----------------------------------------
> Date: Tue, 18 Dec 2007 15:29:08 +0100
> From: magnus.andersson at chalmers.se
> To: gmx-users at gromacs.org
> Subject: [gmx-users] insert protein in membrane again
> 
> Hi again,
> 
> As I use genbox with my .gro file holding the protein and my .gro file
> containing the membrane I get the error message:
> 
> Fatal error: Invalid line in protein.gro for atom 2296:
> 
> There is no atom 2296 in protein.gro...
> 
> I must be missing something?
> 
> /Magnus
> 
> 
> -- 
> Magnus Andersson
> 
> Chalmers University of Technology
> Dept of Chemistry and Biological Engineering
> Email: magnus.andersson at chalmers.se
> Homepage:  http://www.csb.gu.se/neutze/
> Phone: +46 (0)31-786 3917
> Fax: +46 (0)31-786 3910
> Lundberg Laboratory
> Medicinaregatan 9e
> SE-413 90 Göteborg
> Sweden
> 
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