[gmx-users] fitting procedure in g_rmsf

sridhar at cdfd.org.in sridhar at cdfd.org.in
Fri Feb 2 15:37:47 CET 2007


I have a rather basic query.
I want to know which atoms of the reference structure will be used for
fitting , in g_rmsf program.
In the program g_rms there are separate options for fitting and
calcualation of rmsd. I wonder if it is possible for the user to select a
set of atoms for fitting and calculate the rmsf over another range of
atoms or the whole protein, similar as in g_rms program.

Waiting for your suggessions.


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