[gmx-users] H-bond problems

Marcelo Fabricio Masman mmasman at gmail.com
Tue Feb 6 22:54:41 CET 2007


Dear All,

I am running a protein-drug simulation. I have got a 10 ns simulation
and I want to know the number of protein/drug H-bonds, but I get this
error message:

Found 4 different hydrogen bonds in trajectory
Merging hbonds with Acceptor and Donor swapped
Segmentation fault

This error message appears after reading ALL trajectory frames.
Could anyone help me?

Thanks in advance

Marcelo



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