[gmx-users] gromacs-3.3 build on linux. make fails

David van der Spoel spoel at xray.bmc.uu.se
Sat Feb 10 08:54:45 CET 2007

susan james wrote:
> here's a bit more(below) of the make build that failed.
> I've captured the last lines.
> I think it may indeed have something to do with gcc4.
> mpicc is in the path.
> I'm wondering if I should set this variable:
> CC=gcc4
> instead of
> CC=mpicc
> any ideas on this?
> > 
you do want to use mpicc which gives you all the libraries and include 
paths. but please check whether you have another gcc installed, or what 
the default gcc is (gcc -V). You can usually set a variable like
if you have an executable gcc3 somewhere.

by the way, your log snippet did not have the info from compiling the 
directory, where something went wrong, apparently

David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se

More information about the gromacs.org_gmx-users mailing list