[gmx-users] Help: the coordinates in INM modes
jia_11_osu at yahoo.com
Thu Feb 15 02:56:51 CET 2007
I am doing the INM analysis. I get the eigenvector
file eigenvector.trr. According to my understanding, I
can get the corrdinates of the system based on those
INM modes by the command:
g_anaeig -proj -v eigenvector.trr -proj proj.xvg
But what I get from proj.xvg is pretty stange. Except
the first few values, all of them are 0.
Is it reasonable? Or I misunderstood how to use
g_anaeig. Really appretiate your help. I have been
confused for somtime.
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