[gmx-users] system and box collapsed

Mark Abraham Mark.Abraham at anu.edu.au
Wed Feb 28 13:35:57 CET 2007

Qiang Zhong wrote:
> Dear users:
>      I have a protein complex,which is docking result that from cluspr server,The
> complex maybe not perfect,So when I simulate it on gromacs ,many linus warning was
> reported.
>      Could somebody tell me how to handle this problem,how to pre-optimize the
> complex,Thank you very much!

Have you tried following the methodologies in the tutorials?


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