[gmx-users] Inclusion of an angle-angle cross term?
David van der Spoel
spoel at xray.bmc.uu.se
Wed Jun 20 20:21:43 CEST 2007
Lee-Ping wrote:
> Hi there,
>
> I'm working on fitting some force field parameters to a batch of ab-initio
> single-point force calculations, and the fit still needs improvement. I'm
> thinking of including an angle-angle cross term in my custom force field,
> but so far I haven't found that GROMACS can implement this. I think that
> five atom labels and three parameters are needed to describe such an
> interaction; can GROMACS do this right now? Thanks.
>
It won't work out of the box, but in principle it is not very difficult.
Appendix B4 describes which files to modify.
--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://folding.bmc.uu.se
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