[gmx-users] RE:Correction to reference

David van der Spoel spoel at xray.bmc.uu.se
Fri Jun 22 09:29:16 CEST 2007


Junfang.Zhang at csiro.au wrote:
> Dear Gromacs Users,
> 
> I noticed in the description of g_tcaf
> 
> JCP 49 (1994) should be changed to
> 
> Physical Review E 49 (1994)

thanks, it had been fixed in CVS already.
> 
> Regards,
> 
> Junfang Zhang
> 
> -----Original Message-----
> From: gmx-users-bounces at gromacs.org
> [mailto:gmx-users-bounces at gromacs.org] On Behalf Of Mark Abraham
> Sent: Thursday, 21 June 2007 12:52 PM
> To: Discussion list for GROMACS users
> Subject: Re: [gmx-users] RE:Shear viscosity/bulk viscosity
> 
> Junfang.Zhang at csiro.au wrote:
>> Dear Gromacs Users,
>>
>>
>> When I use the command
>>
>> g_energy_d  -vis -f  *.edr 
>>  
>> files such as, evisco.xvg and visco.xvg are generated. evisco.xvg have
> 4
>> columns and viso.xvg has 2 colums. Can you please let me know what
> they
>> are, as I failed to find the explanations in 6.5 of the manual and the
>> paper published in the Journal of chemical physics 116:209-217, 2002. 
> 
> Thanks for letting us know how you've tried to solve the problem. Do the
> 
> comments on the top of the .xvg file clarify this?
> 
> Mark
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
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