[gmx-users] MONITORING SALT BRIDGES

[David van der Spoel]

jayant_jacques wrote:
> hi!
> Is there any way to monitor formation of salt bridges in amino acids of 
> interest rather than all the salt bridges formed during simulations. Is 
> it possible with the g_saltbr function?

g_hbond

> Thanks
> Jayant
> 
> Jayasundar Jayant James
> Postdoc,
> Department of Veterinary and Comparative Anatomy, Pharmacology 
> and Physiology(VCAPP), Washington state university, Pullman 
> 99164-6520, USA.
> http://www.chick.com/reading/tracts/0001/0001_01.asp
> Phone office:335-5937, Cell:1-509-432-5790
> 
> dreams 
> <http://adworks.rediff.com/cgi-bin/AdWorks/click.cgi/www.rediff.com/signature-home.htm/1050715198@Middle5/1210017_1203844/1209206/1?PARTNER=3&OAS_QUERY=null 
> target=new >
> 
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
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