[gmx-users] representative structure using g-cluster

bmmothan at ucalgary.ca bmmothan at ucalgary.ca
Thu Jun 28 18:31:58 CEST 2007

hello all,

I am trying to get the best representative structure of a 40ns MD of a 
receptor to use for free energy calculations.

I want to have an idea what is the best way to do that.

I am using g_cluster with the gromos method. Is there a way to estimate
the noise errors of the cluster analysis.

Thank you

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