[gmx-users] Restarting a crashed MD run
David van der Spoel
spoel at xray.bmc.uu.se
Tue May 1 19:39:25 CEST 2007
bmmothan at ucalgary.ca wrote:
> Hi Tsjerk,
>
> thank u for the answer. I checked my mdp file (nstvout=0). I just want to
> make sure that since nstvout=0 in my mdp file, and I used tpbconv means
> that it generated the run from the beginning of the crashed run? not the
> last frame? i
>
>
run gmxcheck on your trr file to see how many frames you have with
velocities.
--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://folding.bmc.uu.se
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