May 2007 Archives by thread

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Starting: Tue May 1 01:12:41 CEST 2007
Ending: Thu May 31 18:47:46 CEST 2007
Messages: 707

• [gmx-users] use of -dt   bmmothan at ucalgary.ca
  • [gmx-users] use of -dt   Mark Abraham
• [gmx-users] Initial Temperature   George Abadir
  • [gmx-users] Initial Temperature   Dallas B. Warren
  • [gmx-users] Initial Temperature   Mark Abraham
    • [gmx-users] Initial Temperature   George Abadir
• [gmx-users] Can I add extra LJ and electrostatic interactions for 1-2 or 1-3 interactions.   intelandamd
  • [gmx-users] Can I add extra LJ and electrostatic interactions for 1-2 or 1-3 interactions.   Mark Abraham
  • [gmx-users] Can I add extra LJ and electrostatic interactions for 1-2 or 1-3 interactions.   Yang Ye
• [gmx-users] Pressure Coupling   George Abadir
  • [gmx-users] Pressure Coupling   Dallas B. Warren
    • [gmx-users] Pressure Coupling   George Abadir
• [gmx-users] HG at active site of alcohol dehydrogenase   Mahnam
  • [gmx-users] HG at active site of alcohol dehydrogenase   Tsjerk Wassenaar
  • [gmx-users] General Flowsheet for GROMACS   Dallas B. Warren
• [gmx-users] energy of each residue??   Pradeep Kota
  • [gmx-users] energy of each residue??   Tsjerk Wassenaar
    • [gmx-users] energy of each residue??   Pradeep Kota
      • [gmx-users] energy of each residue??   Tsjerk Wassenaar
      • [gmx-users] energy of each residue??   Pradeep Kota
      • [gmx-users] energy of each residue??   Mark Abraham
• [gmx-users] Regarding DOPC parameters   naga raju
  • [gmx-users] Regarding DOPC parameters   Tsjerk Wassenaar
• [gmx-users] Electrostatic potential   Georgios Patargias
  • [gmx-users] Electrostatic potential   Dallas B. Warren
  • [gmx-users] Electrostatic potential   Mark Abraham
    • [gmx-users] GROMACS Wiki   Dallas B. Warren
      • [gmx-users] GROMACS Wiki   Mark Abraham
      • [gmx-users] GROMACS Wiki   Dallas B. Warren
      • [gmx-users] GROMACS Wiki   Erik Lindahl
      • [gmx-users] GROMACS Wiki   Dallas B. Warren
      • [gmx-users] GROMACS Wiki   Mark Abraham
      • [gmx-users] GROMACS Wiki   David van der Spoel
      • [gmx-users] GROMACS Wiki   Mark Abraham
      • [gmx-users] GROMACS Wiki   Florian Haberl
      • [gmx-users] GROMACS Wiki   David van der Spoel
      • [gmx-users] GROMACS Wiki   Erik Lindahl
      • [gmx-users] GROMACS Wiki   David Mobley
    • [gmx-users] Electrostatic potential   Georgios Patargias
• [gmx-users] Restarting a crashed MD run   bmmothan at ucalgary.ca
  • [gmx-users] Restarting a crashed MD run   Tsjerk Wassenaar
    • [gmx-users] Restarting a crashed MD run   bmmothan at ucalgary.ca
      • [gmx-users] Restarting a crashed MD run   David van der Spoel
      • [gmx-users] Restarting a crashed MD run   bmmothan at ucalgary.ca
      • [gmx-users] Restarting a crashed MD run   David van der Spoel
      • [gmx-users] Restarting a crashed MD run   bmmothan at ucalgary.ca
      • [gmx-users] Restarting a crashed MD run   David van der Spoel
      • [gmx-users] Restarting a crashed MD run   Viswanadham Sridhara
      • [gmx-users] Restarting a crashed MD run   bmmothan at ucalgary.ca
      • [gmx-users] Restarting a crashed MD run   Mark Abraham
• [gmx-users] Wall feature   Luis Moux
  • [gmx-users] Wall feature   David van der Spoel
    • [gmx-users] Wall feature   Berk Hess
• [gmx-users] Workshop on Molecular Docking, Complexity and Optimization   Carsten Baldauf
• [gmx-users] g_energy sum   Berk Hess
• [gmx-users] MD runs and subsequent error   Joern Lenz
  • [gmx-users] MD runs and subsequent error   Erik Marklund
• [gmx-users] l-bfgs   Sona Aramyan
  • [gmx-users] l-bfgs   Erik Marklund
    • [gmx-users] l-bfgs   Tsjerk Wassenaar
      • [gmx-users] l-bfgs   Sona Aramyan
• [gmx-users] rotational fit in XY plane only   Dr Itamar Kass
  • [gmx-users] rotational fit in XY plane only   Berk Hess
    • [gmx-users] rotational fit in XY plane only   Bert de Groot
      • [gmx-users] rotational fit in XY plane only   Nguyen Hoang Phuong
    • [gmx-users] rotational fit in XY plane only   Berk Hess
      • [gmx-users] rotational fit in XY plane only   Erik Marklund
      • [gmx-users] rotational fit in XY plane only   Itamar Kass
      • [gmx-users] rotational fit in XY plane only   Tsjerk Wassenaar
      • [gmx-users] rotational fit in XY plane only   Itamar Kass
      • [gmx-users] rotational fit in XY plane only   Berk Hess
• [gmx-users] topology for nitrosylated cysteine?   Daniel Rigden
• [gmx-users] GROMACS Wiki   Moore, Jonathan (J)
• [gmx-users] cutting out a portion of a crystal using triclinic box   Andrea Robben Browning
  • [gmx-users] cutting out a portion of a crystal using triclinic box   Mark Abraham
    • [gmx-users] cutting out a portion of a crystal using triclinic box   Tsjerk Wassenaar
      • [gmx-users] cutting out a portion of a crystal using triclinic box   Mark Abraham
      • [gmx-users] cutting out a portion of a crystal using triclinic box   David van der Spoel
• [gmx-users] Compressibility issue - real concern   Jones de Andrade
  • [gmx-users] Compressibility issue - real concern   Berk Hess
    • [gmx-users] Compressibility issue - real concern   Jones de Andrade
      • [gmx-users] Compressibility issue - real concern   Erik Lindahl
      • [gmx-users] Compressibility issue - real concern   Jones de Andrade
      • [gmx-users] Compressibility issue - real concern   Jones de Andrade
      • [gmx-users] Compressibility issue - real concern   Erik Lindahl
• [gmx-users] (no subject)   Zuzana Benkova
• [gmx-users] PVT-simulation   Jiang ran
  • [gmx-users] PVT-simulation   Mark Abraham
    • [gmx-users] PVT-simulation   Erik Marklund
• [gmx-users] Temperature increase   Zuzana Benkova
  • [gmx-users] Temperature increase   Mark Abraham
    • [gmx-users] Temperature increase   Zuzana Benkova
• [gmx-users] PVT-simulation   Jiang ran
• [gmx-users] How to preserve the original sequence number   Stéphane Téletchéa
• [gmx-users] Unable to swith from NVT to NPT   Stéphane Téletchéa
  • [gmx-users] Unable to swith from NVT to NPT   Mark Abraham
    • [gmx-users] Unable to swith from NVT to NPT   Stéphane Téletchéa
• [gmx-users] xmgrace   Michal Walczak
  • [gmx-users] xmgrace   Mark Abraham
  • [gmx-users] xmgrace   Florian Haberl
• [gmx-users] Carbon Nanotube-Protein interaction   George Abadir
  • [gmx-users] Carbon Nanotube-Protein interaction   Dallas B. Warren
• [gmx-users] RE: Energy conservation in collision   Janne Hirvi
• [gmx-users] Energy conservation of crystal surface   Janne Hirvi
• [gmx-users] Energy minimization problem(1-4 interaction at distance 3.540 is larger than the 1-4 table size 1.000 nm)   Arun kumar
  • [gmx-users] Energy minimization problem(1-4 interaction at distance 3.540 is larger than the 1-4 table size 1.000 nm)   Tsjerk Wassenaar
• [gmx-users] Question on [ angles ] in topology file?   Chze Ling Wee
  • [gmx-users] Question on [ angles ] in topology file?   David van der Spoel
  • [gmx-users] Question on [ angles ] in topology file?   Yang Ye
• [gmx-users] g_sas   Arthur Roberts
  • [gmx-users] g_sas   Tsjerk Wassenaar
    • [gmx-users] What are lines for g_sas -or file.xvg not g_sas -o file.xvg?   Arthur Roberts
      • [gmx-users] What are lines for g_sas -or file.xvg not g_sas -o file.xvg?   David van der Spoel
• [gmx-users] Positive Potential Energy   George Abadir
• [gmx-users] double-checking   V. Tanchuk
  • [gmx-users] double-checking   Mark Abraham
• [gmx-users] Re: gmx-users Digest, Vol 37, Issue 18   Arun kumar
• [gmx-users] Re: Energy minimization problem(1-4 interaction at distance 3.540 is larger than the 1-4 table size 1.000 nm)   Arun kumar
  • [gmx-users] Re: Energy minimization problem(1-4 interaction at distance 3.540 is larger than the 1-4 table size 1.000 nm)   David van der Spoel
  • [gmx-users] Re: Energy minimization problem(1-4 interaction at distance 3.540 is larger than the 1-4 table size 1.000 nm)   Mark Abraham
    • [gmx-users] Re: Energy minimization problem(1-4 interaction at distance 3.540 is larger than the 1-4 table size 1.000 nm)   Arun kumar
• [gmx-users] Document about file input format to GROMACS program?   root
  • [gmx-users] Document about file input format to GROMACS program?   David van der Spoel
  • [gmx-users] Document about file input format to GROMACS program?   Mark Abraham
• [gmx-users] Positive and negative ions move in the same direction under a constant electric field?   林揚善
  • [gmx-users] Positive and negative ions move in the same direction under a constant electric field?   Mark Abraham
    • [gmx-users] Positive and negative ions move in the same direction under a constant electric field?   Tom Weingarten
      • [gmx-users] Positive and negative ions move in the same direction under a constant electric field?   Mark Abraham
• [gmx-users] Energy conservation of crystal surface (specification)   Janne Hirvi
  • [gmx-users] Energy conservation of crystal surface (specification)   Berk Hess
• [gmx-users] Targeted Molecular dynamics   Olivier Perin
  • [gmx-users] Targeted Molecular dynamics   Mark Abraham
    • [gmx-users] Targeted Molecular dynamics   Berk Hess
  • [gmx-users] Targeted Molecular dynamics   Jay Mashl
• [gmx-users] Re: Energy conservation of crystal surface (specification)   Janne Hirvi
  • [gmx-users] Re: Energy conservation of crystal surface(specification)   Berk Hess
• [gmx-users] Regarding conversion of C6/C12 parameters in .itp file   naga raju
• [gmx-users] Regarding DOPC lipid parameters   naga raju
• [gmx-users] Very large fluctuations in dg/dl   Patrick Fuchs
  • [gmx-users] Very large fluctuations in dg/dl   Berk Hess
    • [gmx-users] Very large fluctuations in dg/dl   Tsjerk Wassenaar
      • [gmx-users] Very large fluctuations in dg/dl   Berk Hess
      • [gmx-users] Very large fluctuations in dg/dl   Patrick Fuchs
      • [gmx-users] Very large fluctuations in dg/dl   Berk Hess
      • [gmx-users] Very large fluctuations in dg/dl   Patrick Fuchs
      • [gmx-users] Very large fluctuations in dg/dl   Berk Hess
  • [gmx-users] Very large fluctuations in dg/dl   Stéphane Téletchéa
    • [gmx-users] Very large fluctuations in dg/dl   Lars Schaefer
    • [gmx-users] Very large fluctuations in dg/dl   Berk Hess
    • [gmx-users] Very large fluctuations in dg/dl   Patrick Fuchs
• [gmx-users] Problems using grompp and amber force field   root
  • [gmx-users] Problems using grompp and amber force field   David van der Spoel
• [gmx-users] Cys-Cys Bond   fulya caglar
  • [gmx-users] Cys-Cys Bond   Mark Abraham
• [gmx-users] Problems using grompp and amber force field   TJ Piggot
• [gmx-users] Very large fluctuations in dg/dl   John D. Chodera
  • [gmx-users] Very large fluctuations in dg/dl   Patrick Fuchs
    • [gmx-users] Very large fluctuations in dg/dl   John D. Chodera
      • [gmx-users] Very large fluctuations in dg/dl   Patrick Fuchs
    • [gmx-users] Very large fluctuations in dg/dl   David Mobley
• [gmx-users] Problems using grompp and amber force field   root
  • [gmx-users] Problems using grompp and amber force field   Erik Marklund
    • [gmx-users] Problems using grompp and amber force field   root
      • [gmx-users] Problems using grompp and amber force field   Mark Abraham
      • [gmx-users] Problems using grompp and amber force field   TJ Piggot
      • [gmx-users] Problems using grompp and amber force field   root
      • [gmx-users] Problems using grompp and amber force field   Maik Goette
• [gmx-users] (no subject)   vijaya subramanian
  • [gmx-users] (no subject)   Mark Abraham
    • [gmx-users] (no subject)   vijaya subramanian
      • [gmx-users] (no subject)   David van der Spoel
      • [gmx-users] (no subject)   vijaya subramanian
• [gmx-users] Visualization Problem   George Abadir
  • [gmx-users] Visualization Problem   Itamar Kass
    • [gmx-users] Visualization Problem   George Abadir
      • [gmx-users] Visualization Problem   Dallas B. Warren
• [gmx-users] Fatal error:Atom S in residue TYR 2 not found in rtp entry with 18 atoms   kong.winter
  • [gmx-users] Fatal error:Atom S in residue TYR 2 not found in rtp entry with 18 atoms   Tsjerk Wassenaar
• [gmx-users] Regarding conversion of C6/C12 parameters to sigma/epsilon   naga raju
  • [gmx-users] Regarding conversion of C6/C12 parameters to sigma/epsilon   Mark Abraham
• [gmx-users] Residue 'SIA' not found in residue topology database   kong.winter
  • [gmx-users] Residue 'SIA' not found in residue topology database   Tsjerk Wassenaar
  • [gmx-users] Residue 'SIA' not found in residue topology database   Mark Abraham
    • [gmx-users] Residue 'SIA' not found in residue topology database   Maik Goette
      • [gmx-users] Residue 'SIA' not found in residue topology database   Mark Abraham
• Fwd: [gmx-users] Fatal error:Atom S in residue TYR 2 not found   Tsjerk Wassenaar
• [gmx-users] bonus of MediaWiki   Mark Abraham
  • [gmx-users] bonus of MediaWiki   David van der Spoel
• [gmx-users] afm pull rate and pull info conflict   M.N. Manoj
  • [gmx-users] afm pull rate and pull info conflict   Mark Abraham
• [gmx-users] Trjconv: reducing frames and Time issue   bmmothan at ucalgary.ca
• [gmx-users] Trjconv: reducing frames and Time issue   Alan Dodd
  • [gmx-users] Trjconv: reducing frames and Time issue   Tsjerk Wassenaar
• [gmx-users] Human Serum Albumin problem   George Abadir
  • [gmx-users] Human Serum Albumin problem   Sampo Karkola
  • [gmx-users] Human Serum Albumin problem   Florian Haberl
• [gmx-users] change the ligand in pdb file   Rui Li
  • [gmx-users] change the ligand in pdb file   Erik Marklund
  • [gmx-users] change the ligand in pdb file   Florian Haberl
• [gmx-users] eigenvectors in eigenvec.trr file   sunita at chem.iitb.ac.in
  • [gmx-users] eigenvectors in eigenvec.trr file   Tsjerk Wassenaar
• [gmx-users] Parameter QMcharge does not work with Gromacs-CPMD   Christian Seifert
• [gmx-users] charge   pkmukher
  • [gmx-users] charge   David Mobley
• [gmx-users] nst option in g_cluster seems to be not working   sunita at chem.iitb.ac.in
• [gmx-users] how to use demux.pl for REMD analysis   N-J.M. Macaluso
  • [gmx-users] how to use demux.pl for REMD analysis   Mark Abraham
    • [gmx-users] how to use demux.pl for REMD analysis   David van der Spoel
• [gmx-users] cosine content   sunita at chem.iitb.ac.in
  • [gmx-users] cosine content   sunita at chem.iitb.ac.in
• [gmx-users] Parameterizing a force field   Lee-Ping
  • [gmx-users] Parameterizing a force field   Mark Abraham
  • [gmx-users] Parameterizing a force field   Dallas B. Warren
• [gmx-users] change the ligand in pdb file   Rui Li
• [gmx-users] problem with grompp and atomtype   Anna Marabotti
  • [gmx-users] problem with grompp and atomtype   Stéphane Téletchéa
• [gmx-users] Question on analyzing REMD simulation   N-J.M. Macaluso
  • [gmx-users] Question on analyzing REMD simulation   Mark Abraham
• [gmx-users] EM steep Total Energy   Claus Valka
  • [gmx-users] EM steep Total Energy   Berk Hess
    • [gmx-users] EM steep Total Energy   Claus Valka
• [gmx-users] fwspider and drug-enzyme tutorials   John E. Kerrigan
  • [gmx-users] fwspider and drug-enzyme tutorials   Erik Lindahl
• [gmx-users] Where to start ? Gmx Newb !!   I BioKid
  • [gmx-users] Where to start ? Gmx Newb !!   Lars Schaefer
  • [gmx-users] Where to start ? Gmx Newb !!   Mitchell Stanton-Cook
• [gmx-users] grompp atomtype problem   John E. Kerrigan
  • [gmx-users] grompp atomtype problem   Mitchell Stanton-Cook
  • [gmx-users] R: grompp atomtype problem   Anna Marabotti
• [gmx-users] Regarding conversion of C6/C12 parameters to sigma/epsilon   Chris Neale
• [gmx-users] Creating topology file for TBA cation using OPLS force field   Andrey A. Koverga
  • [gmx-users] Creating topology file for TBA cation using OPLS force field   Mark Abraham
• [gmx-users] Re: Parameterizing a force field (Mark Abraham)   Lee-Ping
  • [gmx-users] Re: Parameterizing a force field (Mark Abraham)   Mark Abraham
• [gmx-users] error estimates of free energy calculations   Jeroen van Bemmelen
  • [gmx-users] error estimates of free energy calculations   David Mobley
    • [gmx-users] error estimates of free energy calculations   Berk Hess
• [gmx-users] problem with freeze-group : Large VCM   jagannath mondal
  • [gmx-users] problem with freeze-group : Large VCM   Berk Hess
    • [gmx-users] problem with freeze-group : Large VCM(Berk Hess)   jagannath mondal
      • [gmx-users] problem with freeze-group : Large VCM(Berk Hess)   Berk Hess
• [gmx-users] CNT-protein interaction   George Abadir
  • [gmx-users] CNT-protein interaction   Robert Johnson
    • [gmx-users] CNT-protein interaction   George Abadir
• [gmx-users] grompp error for customized topology   singh
• [gmx-users] Cannot find fftw3f   Omovie, Sheyore John
  • [gmx-users] Cannot find fftw3f   Mark Abraham
• [gmx-users] carbon atom not found by pdb2gmx and modification of specbond.dat   Nicolas Sapay
  • [gmx-users] area for DOPC bilayer   Lu Lanyuan
  • [gmx-users] carbon atom not found by pdb2gmx and modification of specbond.dat   David van der Spoel
    • [gmx-users] carbon atom not found by pdb2gmx and modification of specbond.dat   Nicolas Sapay
      • [gmx-users] carbon atom not found by pdb2gmx and modification of specbond.dat   Nicolas Sapay
      • [gmx-users] carbon atom not found by pdb2gmx and modification of specbond.dat   Tsjerk Wassenaar
• [gmx-users] suggest small revision to genbox   David Mobley
  • [gmx-users] suggest small revision to genbox   bharat v. adkar
  • [gmx-users] suggest small revision to genbox   David van der Spoel
• [gmx-users] CNT Potassium doping with GROMACS   George Abadir
  • [gmx-users] CNT Potassium doping with GROMACS   George Abadir
  • [gmx-users] CNT Potassium doping with GROMACS   David van der Spoel
• [gmx-users] Error while running MD in DMSO!   Anil Kumar
  • [gmx-users] Error while running MD in DMSO!   Mark Abraham
• [gmx-users] Error while running grompp for em (MD) in Urea   Anil Kumar
  • [gmx-users] Error while running grompp for em (MD) in Urea   Mark Abraham
• [gmx-users] area for DOPC bilayer   Justin MacCallum
• [gmx-users] Re : Positive and negative ions move in the same direction under a constant electric field?   林揚善
  • [gmx-users] Re : Positive and negative ions move in the same direction under a constant electric field?   Mark Abraham
  • [gmx-users] Re : Positive and negative ions move in the same direction under a constant electric field?   David van der Spoel
• [gmx-users] energy minimization of POPC crash   Shan shan Qin
• [gmx-users] protein in popc   mahbubeh zarrabi
• [gmx-users] about counterions   Rui Li
  • [gmx-users] about counterions   Mark Abraham
• [gmx-users] How to read xtc file?   Hu Zhongqiao
  • [gmx-users] How to read xtc file?   Mark Abraham
• [gmx-users] Ligand Parameters   Justin Lemkul
  • [gmx-users] Ligand Parameters   David Mobley
    • [gmx-users] Ligand Parameters   Justin Lemkul
    • [gmx-users] Ligand Parameters   Mark Abraham
  • [gmx-users] Ligand Parameters   FyD
    • [gmx-users] Ligand Parameters   Justin Lemkul
• [gmx-users] TREMD in development version   N-J.M. Macaluso
  • [gmx-users] TREMD in development version   David van der Spoel
• [gmx-users] question about g_rmsdist   Fabrizio Mancinelli
• [gmx-users] ci variable range error in parallel but NOT in serial   dtmirij
  • [gmx-users] ci variable range error in parallel but NOT in serial   Mark Abraham
• [gmx-users] turning off output of dgdl.xvg and VCM messages?   David Mobley
• [gmx-users] protein in popc   Chris Neale
  • [gmx-users] energy minimization of POPC crash   Dallas B. Warren
• [gmx-users] Re: How to read xtc file?   Hu Zhongqiao
  • [gmx-users] Re: How to read xtc file?   Yang Ye
    • [gmx-users] Re: How to read xtc file?   Tsjerk Wassenaar
• [gmx-users] about counterions   Rui Li
  • [gmx-users] about counterions   Mark Abraham
• [gmx-users] Call for abstracts: Molecular Docking, Complexity, and Optimization. An ECCS 2007 Satellite Conference.   Carsten Baldauf
• [gmx-users] new default value for emtol with gromacs 3.3???   Jennifer Rendell
  • [gmx-users] new default value for emtol with gromacs 3.3???   David van der Spoel
    • [gmx-users] new default value for emtol with gromacs 3.3???   Erik Lindahl
• [gmx-users] lipid solvent   sebastien santini
  • [gmx-users] lipid solvent   Tsjerk Wassenaar
• [gmx-users] same simulation, different results   Jim Fonseca
  • [gmx-users] same simulation, different results   David van der Spoel
    • [gmx-users] same simulation, different results   Jim Fonseca
      • [gmx-users] same simulation, different results   Stéphane Téletchéa
      • [gmx-users] same simulation, different results   David van der Spoel
      • [gmx-users] same simulation, different results   Jim Fonseca
      • [gmx-users] same simulation, different results   David van der Spoel
      • [gmx-users] same simulation, different results   Ansgar Esztermann
• [gmx-users] error estimates of free energy calculations   Jeroen van Bemmelen
  • [gmx-users] error estimates of free energy calculations   David Mobley
    • [gmx-users] error estimates of free energy calculations   David van der Spoel
      • [gmx-users] error estimates of free energy calculations   Mark Abraham
    • [gmx-users] error estimates of free energy calculations   Berk Hess
      • [gmx-users] error estimates of free energy calculations   Berk Hess
      • [gmx-users] error estimates of free energy calculations   David van der Spoel
      • [gmx-users] error estimates of free energy calculations   Berk Hess
• [gmx-users] gromacs-3.3.1 and gcc-4.1.2   Tuan A. Tran
  • [gmx-users] gromacs-3.3.1 and gcc-4.1.2   David van der Spoel
• [gmx-users] lipid solvent   chris.neale at utoronto.ca
• [gmx-users] Calculating energies of amino acids in a protein using g_energy   abhigna polavarapu
  • [gmx-users] Calculating energies of amino acids in a protein using g_energy   Mark Abraham
    • [gmx-users] Calculating energies of amino acids in a protein using g_energy   Tsjerk Wassenaar
• [gmx-users] amb2gmx code   godawr at rpi.edu
  • [gmx-users] amb2gmx code   David Mobley
• [gmx-users] PBC problem   Mu Yuguang (Dr)
  • [gmx-users] PBC problem   Tsjerk Wassenaar
    • [gmx-users] PBC problem   Mu Yuguang (Dr)
      • [gmx-users] PBC problem   Tsjerk Wassenaar
      • [gmx-users] PBC problem   Mu Yuguang (Dr)
• [gmx-users] Calculating energies of peptides in protein uisng g_energy   abhigna polavarapu
  • [gmx-users] Calculating energies of peptides in protein uisng g_energy   Mark Abraham
• [gmx-users] using VMD with GROMACS trajectories   Mark Abraham
  • [gmx-users] using VMD with GROMACS trajectories   Mark Abraham
    • [gmx-users] using VMD with GROMACS trajectories   Erik Lindahl
• [gmx-users] top   mahbubeh zarrabi
• [gmx-users] Gromacs on Xserver G5 /MPI   abelius
  • [gmx-users] Gromacs on Xserver G5 /MPI   David van der Spoel
    • [gmx-users] Gromacs on Xserver G5 /MPI   abelius
      • [gmx-users] Gromacs on Xserver G5 /MPI   David van der Spoel
• [gmx-users] compatibility of MOPAC charges with GROMACS ?   Daniel Rigden
  • [gmx-users] compatibility of MOPAC charges with GROMACS ?   Dallas B. Warren
    • [gmx-users] compatibility of MOPAC charges with GROMACS ?   David Mobley
      • [gmx-users] compatibility of MOPAC charges with GROMACS ?   Mark Abraham
      • [gmx-users] compatibility of MOPAC charges with GROMACS ?   Marc F. Lensink
• [gmx-users] How to use different reference structures for g_covar and g_anaeig   sridhar at cdfd.org.in
  • [gmx-users] How to use different reference structures for g_covar and g_anaeig   David van der Spoel
    • [gmx-users] How to use different reference structures for g_covar and g_anaeig   Tsjerk Wassenaar
• [gmx-users] Error while doing EM in DMSO.   Anil Kumar
  • [gmx-users] Error while doing EM in DMSO.   David van der Spoel
• [gmx-users] top   chris.neale at utoronto.ca
• [gmx-users] Gromacs on Xserver G5 /MPI   Warner Yuen
• [gmx-users] SGI Altix stack traceback   Aline Rossi
  • [gmx-users] SGI Altix stack traceback   David van der Spoel
  • [gmx-users] SGI Altix stack traceback   Mark Abraham
• [gmx-users] NOC 3.0 is released   mchen2 at mailer.fsu.edu
• [gmx-users] water only   Liqun He
  • [gmx-users] water only   Mark Abraham
• [gmx-users] gromacs future development guidelines?   Jones de Andrade
• [gmx-users] Re: Error while doing EM in DMSO.   Anil Kumar
  • [gmx-users] Re: Error while doing EM in DMSO.   David van der Spoel
• [gmx-users] error in topology file generation   Archana Chavan
  • [gmx-users] error in topology file generation   David van der Spoel
• [gmx-users] Compiling Gromacs on 64 bit windows platform...   Kedar Potdar
  • [gmx-users] Compiling Gromacs on 64 bit windows platform...   Mark Abraham
    • [gmx-users] Compiling Gromacs on 64 bit windows platform...   Kedar Potdar
      • [gmx-users] Compiling Gromacs on 64 bit windows platform...   Mark Abraham
• [gmx-users] FEP with real or dummy charges?   Georgios Patargias
  • [gmx-users] FEP with real or dummy charges?   Maik Goette
    • [gmx-users] FEP with real or dummy charges?   Georgios Patargias
      • [gmx-users] FEP with real or dummy charges?   Maik Goette
      • [gmx-users] FEP with real or dummy charges?   Georgios Patargias
• [gmx-users] how to increase the number of   Afonso Duarte
  • [gmx-users] how to increase the number of   Mark Abraham
  • [gmx-users] how to increase the number of   Yang Ye
    • [gmx-users] how to increase the number of   Pradeep Kota
      • [gmx-users] how to increase the number of   Mark Abraham
      • [gmx-users] how to increase the number of   Pradeep Kota
• [gmx-users] question about g_rmsdist II   Fabrizio Mancinelli
  • [gmx-users] question about g_rmsdist II   Mark Abraham
    • [gmx-users] question about g_rmsdist II   Erik Marklund
• [gmx-users] bondtype 5   Nicolas Schmidt
  • [gmx-users] bondtype 5   David van der Spoel
    • [gmx-users] bondtype 5   Mark Abraham
• [gmx-users] problem with genion   OZGE ENGIN
  • [gmx-users] problem with genion   Mark Abraham
  • [gmx-users] problem with genion   David van der Spoel
• [gmx-users] Calculate individual force between each atom pair   WU Yanbin
  • [gmx-users] Calculate individual force between each atom pair   Mark Abraham
• [gmx-users] initial configuration problems and energy minimization   Arun kumar
  • [gmx-users] initial configuration problems and energy minimization   Mark Abraham
    • [gmx-users] initial configuration problems and energy minimization   Arun kumar
• [gmx-users] energy minimization - double precision   Pradeep Kota
  • [gmx-users] energy minimization - double precision   Mark Abraham
  • [gmx-users] energy minimization - double precision   Tsjerk Wassenaar
• [gmx-users] glibc error with g_density (only for some cases)   Arun kumar
  • [gmx-users] glibc error with g_density (only for some cases)   Mark Abraham
    • [gmx-users] glibc error with g_density (only for some cases)   Arun kumar
      • [gmx-users] glibc error with g_density (only for some cases)   David van der Spoel
      • [gmx-users] glibc error with g_density (only for some cases)   Arun kumar
      • [gmx-users] glibc error with g_density (only for some cases)   David van der Spoel
      • [gmx-users] glibc error with g_density (only for some cases)   Arun kumar
• [gmx-users] zirconia   pushyami atluri
  • [gmx-users] zirconia   David van der Spoel
• [gmx-users] Language & manners on the list   lindahl at sbc.su.se
• [gmx-users] Testing Gromacs   Kedar Potdar
  • [gmx-users] Testing Gromacs   David van der Spoel
  • [gmx-users] Testing Gromacs   Stéphane Téletchéa
• [gmx-users] atom types @ bonded parameters   Francesco Pietra
  • [gmx-users] atom types @ bonded parameters   David van der Spoel
    • [gmx-users] atom types @ bonded parameters   Francesco Pietra
      • [gmx-users] atom types @ bonded parameters   David van der Spoel
• [gmx-users] how to increase the number of   Afonso Duarte
• [gmx-users] custom water model in gromacs   Diamantis Sellis
  • [gmx-users] custom water model in gromacs   David van der Spoel
    • [gmx-users] seriell but parallel ???   Nicolas Schmidt
      • [gmx-users] seriell but parallel ???   David van der Spoel
• [gmx-users] gromacs-antechamber-gaff   Francesco Pietra
  • [gmx-users] gromacs-antechamber-gaff   David van der Spoel
    • [gmx-users] gromacs-antechamber-gaff   David Mobley
      • [gmx-users] gromacs-antechamber-gaff   Francesco Pietra
      • [gmx-users] gromacs-antechamber-gaff   David Mobley
• [gmx-users] energy minimization - double precision   Dr Itamar Kass
• [gmx-users] antechamber installation   Francesco Pietra
  • [gmx-users] antechamber installation   Tsjerk Wassenaar
    • [gmx-users] antechamber installation   Maik Goette
• [gmx-users] regarding zirconia   pushyami atluri
  • [gmx-users] regarding zirconia   David van der Spoel
• [gmx-users] zirconia agen   pushyami atluri
  • [gmx-users] zirconia agen   David van der Spoel
• [gmx-users] Two polypeptides in one box   Sheyore Omovie
  • [gmx-users] Two polypeptides in one box   Martin Höfling
• [gmx-users] Two polypeptides in one box   Yang Ye
• [gmx-users] ci variable range error in parallel but NOT in serial   dtmirij
  • [gmx-users] ci variable range error in parallel but NOT in serial   David van der Spoel
    • [gmx-users] ci variable range error in parallel but NOT in serial   dtmirij
      • [gmx-users] ci variable range error in parallel but NOT in serial   David van der Spoel
• [gmx-users] Error with Energy minimisation   Sheyore Omovie
  • [gmx-users] Error with Energy minimisation   Mark Abraham
    • [gmx-users] Error with Energy minimisation   Sheyore Omovie
• [gmx-users] Polarizability   Jones de Andrade
  • [gmx-users] Polarizability   David van der Spoel
    • [gmx-users] Polarizability   Jones de Andrade
      • [gmx-users] Polarizability   David van der Spoel
      • [gmx-users] Polarizability   Jones de Andrade
      • [gmx-users] Polarizability   Patrick Fuchs
      • [gmx-users] Polarizability   Jones de Andrade
      • [gmx-users] Polarizability   Patrick Fuchs
• [gmx-users] Two polypeptides in one box   Yang Ye
• [gmx-users] What molecule generator should be used if using GROMOS Force Field?   WU Yanbin
  • [gmx-users] What molecule generator should be used if using GROMOS Force Field?   David van der Spoel
  • [gmx-users] What molecule generator should be used if using GROMOS Force Field?   Stéphane Téletchéa
    • [gmx-users] What molecule generator should be used if using GROMOS Force Field?   Mark Abraham
      • [gmx-users] What molecule generator should be used if using GROMOS Force Field?   Stéphane Téletchéa
      • [gmx-users] What molecule generator should be used if using GROMOS Force Field?   Mark Abraham
  • [gmx-users] What molecule generator should be used if using GROMOS Force Field?   Christian Burisch
• [gmx-users] pH   Dmitriy Golubovsky
  • [gmx-users] pH   David van der Spoel
    • [gmx-users] pH   Erik Marklund
      • [gmx-users] pH   Miguel Machuqueiro
  • [gmx-users] pH   Mark Abraham
• [gmx-users] Re: gmx-users Digest, Vol 37, Issue 73   Dmitriy Golubovsky
  • [gmx-users] Re: gmx-users Digest, Vol 37, Issue 73   David van der Spoel
• [gmx-users] Re: Calculate individual force between each atom pair   WU Yanbin
  • [gmx-users] Re: Calculate individual force between each atom pair   Erik Lindahl
• [gmx-users] readxtc can not get coordinates without jump?   Hu Zhongqiao
  • [gmx-users] readxtc can not get coordinates without jump?   Tsjerk Wassenaar
• [gmx-users] REMD log files   N-J.M. Macaluso
  • [gmx-users] REMD log files   David van der Spoel
• [gmx-users] Strategy for chaining jobs using different mdp parameters (long)   Stéphane Téletchéa
  • [gmx-users] Strategy for chaining jobs using different mdp parameters (long)   Mark Abraham
    • [gmx-users] Strategy for chaining jobs using differentmdp parameters (long)   Berk Hess
• [gmx-users] Strange error from my simulation   Stéphane Téletchéa
  • [gmx-users] Strange error from my simulation   David van der Spoel
  • [gmx-users] Strange error from my simulation   Mark Abraham
    • [gmx-users] Strange error from my simulation   Tsjerk Wassenaar
      • [gmx-users] Strange error from my simulation   Stéphane Téletchéa
      • [gmx-users] Strange error from my simulation   Tsjerk Wassenaar
      • [gmx-users] Strange error from my simulation   Stéphane Téletchéa
      • [gmx-users] Strange error from my simulation   Mark Abraham
    • [gmx-users] Stuck ...   Stéphane Téletchéa
      • [gmx-users] Stuck ...   David van der Spoel
      • [gmx-users] Stuck ...   Tsjerk Wassenaar
      • [gmx-users] Stuck ...   steletch at jouy.inra.fr
      • [gmx-users] Stuck ...   Erik Lindahl
      • [gmx-users] Stuck ...   Tsjerk Wassenaar
• [gmx-users] fatal error grompp !   Philippe Reymond
  • [gmx-users] fatal error grompp !   Mark Abraham
• [gmx-users] How to check memoryuse limit?   Alif M Latif
  • [gmx-users] How to check memoryuse limit?   Stéphane Téletchéa
    • [gmx-users] How to check memoryuse limit?   Berk Hess
      • [gmx-users] Error in Analysis Script RMSD   Arneh Babakhani
      • [gmx-users] Error in Analysis Script RMSD   David van der Spoel
      • [gmx-users] Error in Analysis Script RMSD   Marco Pasi
      • [gmx-users] Error in Analysis Script RMSD   Mark Abraham
      • [gmx-users] Error in Analysis Script RMSD   Arneh Babakhani
• [gmx-users] (no subject)   jyoung
  • [gmx-users] (no subject)   Erik Lindahl
    • [gmx-users] (no subject)   Tsjerk Wassenaar
  • [gmx-users] (no subject)   Mark Abraham
• [gmx-users] problem with position-restrained dynamics of a charged system   OZGE ENGIN
  • [gmx-users] problem with position-restrained dynamics of a charged system   sebastien santini
• [gmx-users] problem with position-restrained dynamics of a charged system   OZGE ENGIN
  • [gmx-users] problem with position-restrained dynamics of a charged system   sebastien santini
• [gmx-users] problem with position-restrained dynamics of a charged system   OZGE ENGIN
• [gmx-users] g_dist problems   Edvin Erdtman
  • [gmx-users] g_dist problems   Mark Abraham
    • [gmx-users] g_dist problems   Edvin Erdtman
      • [gmx-users] g_dist problems   David van der Spoel
      • [gmx-users] g_dist problems   Edvin Erdtman
      • [gmx-users] g_dist problems   Edvin Erdtman
      • [gmx-users] g_dist problems   Edvin Erdtman
      • [gmx-users] g_dist problems   Edvin Erdtman
      • [gmx-users] g_dist problems   Mark Abraham
• [gmx-users] problem with position-restrained dynamics of a charged system   OZGE ENGIN
  • [gmx-users] problem with position-restrained dynamics of a charged system   Mark Abraham
  • [gmx-users] problem with position-restrained dynamics of a charged system   sebastien santini
• [gmx-users] problem with position-restrained dynamics of a charged system   OZGE ENGIN
• [gmx-users] gettin a amorhous system??   pushyami atluri
  • [gmx-users] gettin a amorhous system??   Mark Abraham
• [gmx-users] bootstrap problem   tomas.itsx at centrum.cz
  • [gmx-users] bootstrap problem   David van der Spoel
    • [gmx-users] bootstrap problem   Erik Lindahl
• [gmx-users] zirconia   pushyami atluri
  • [gmx-users] zirconia   David van der Spoel
• [gmx-users] drug-enzyme tutorial   John Kerrigan
• [gmx-users] Surfactant molecules missing after genbox   Alif M Latif
  • [gmx-users] Surfactant molecules missing after genbox   Mark Abraham
• [gmx-users] "Range checking error" issue   Matteo Guglielmi
  • [gmx-users] "Range checking error" issue   David van der Spoel
    • [gmx-users] "Range checking error" issue   Matteo Guglielmi
      • [gmx-users] "Range checking error" issue   Mark Abraham
      • [gmx-users] "Range checking error" issue   Matteo Guglielmi
      • [gmx-users] "Range checking error" issue   David van der Spoel
      • [gmx-users] "Range checking error" issue   Matteo Guglielmi
      • [gmx-users] "Range checking error" issue   David van der Spoel
• [gmx-users] how to avoid pdb2gmx from deleting duplicates?   Alif M Latif
  • [gmx-users] how to avoid pdb2gmx from deleting duplicates?   Mark Abraham
• [gmx-users] how to find out the average running structure   Sonali
  • [gmx-users] how to find out the average running structure   Mark Abraham
  • [gmx-users] how to find out the average running structure   Florian Haberl
    • [gmx-users] how to find out the average running structure   Tsjerk Wassenaar
• [gmx-users] Re: readxtc can not get coordinates without jump?   Hu Zhongqiao
• [gmx-users] fatal error   Sonali
  • [gmx-users] fatal error   Martin Höfling
    • [gmx-users] fatal error   Berk Hess
• [gmx-users] Restarting AFM pulling   Semen Esilevsky
• [gmx-users] do_dssp for many peptides   Volker Knecht
  • [gmx-users] do_dssp for many peptides   Mark Abraham
• [gmx-users] atom type not found error   mahbubeh zarrabi
  • [gmx-users] atom type not found error   Maik Goette
• [gmx-users] pdb2gmx -merge option take a *very* long time, and doesn't work ...   Stéphane Téletchéa
  • [gmx-users] pdb2gmx -merge option take a *very* long time, and doesn't work ...   Tsjerk Wassenaar
• [gmx-users] bootstrap problem   tomas.itsx at centrum.cz
  • [gmx-users] bootstrap problem   tomas.itsx at centrum.cz
• [gmx-users] make gmx_disre.c error   tomas.itsx at centrum.cz
  • [gmx-users] make gmx_disre.c error   Berk Hess
• [gmx-users] (no subject)   ZhouLong Zhang
  • [gmx-users] (no subject)   Mark Abraham
• [gmx-users] Re: Re: do_dssp for many peptides   Volker Knecht
  • [gmx-users] Re: Re: do_dssp for many peptides   Justin Lemkul
• [gmx-users] do_dssp: main chain   Volker Knecht
  • [gmx-users] do_dssp: main chain   Florian Haberl
• [gmx-users] g_angle dihedrals   Robert fiske
• [gmx-users] hacked...   David Mobley
  • [gmx-users] hacked...   Erik Lindahl
• [gmx-users] Constraining N-H and H-H bonds in ammonium via SETTLE?   John D. Chodera
  • [gmx-users] Constraining N-H and H-H bonds in ammonium via SETTLE?   Erik Lindahl
• [gmx-users] Specified frame doesn't exist or file not seekable   Sonali
  • [gmx-users] Specified frame doesn't exist or file not seekable   David van der Spoel
• [gmx-users] pulling with dodecahedral box   Mareike Zink
  • [gmx-users] pulling with dodecahedral box   Tsjerk Wassenaar
• [gmx-users] BUG!!! AFM pulling/Constraint   Jiang ran
  • [gmx-users] BUG!!! AFM pulling/Constraint   Berk Hess
  • [gmx-users] BUG!!! AFM pulling/Constraint   Mark Abraham
• [gmx-users] free energy tutorial results   Robert fiske
• [gmx-users] free energy tutorial results   Jeroen van Bemmelen
  • [gmx-users] free energy tutorial results   David Mobley
    • [gmx-users] free energy tutorial results   Robert fiske
• [gmx-users] qm mm and charges in GMX!   Samuel Silva Pita
  • [gmx-users] qm mm and charges in GMX!   Mark Abraham
• [gmx-users] cg error   Alif M Latif
  • [gmx-users] cg error   Mark Abraham
• [gmx-users] Regarding downloading make_hole program   naga raju
  • [gmx-users] Regarding downloading make_hole program   Itamar Kass
• [gmx-users] Tutorials   TK.Jiji
  • [gmx-users] Tutorials   Mark Abraham
• [gmx-users] Wiki online   David van der Spoel
• [gmx-users] Regarding downloading make_hole program   naga raju
• [gmx-users] Stuck ...   chris.neale at utoronto.ca
  • [gmx-users] Stuck ...   Tsjerk Wassenaar
• [gmx-users] qm mm and charges in GMX!   Samuel Silva Pita
• [gmx-users] Problems with forcefield amber99 in Gromacs   bo yang
  • [gmx-users] Problems with forcefield amber99 in Gromacs   Mark Abraham
    • [gmx-users] Problems with forcefield amber99 in Gromacs   David van der Spoel
  • [gmx-users] Problems with forcefield amber99 in Gromacs   Maik Goette
• [gmx-users] A special invitation to join Batchmates.com   Sonali Priyadarshini
• [gmx-users] GROMACS not scaling well with Core4 Quad technology CPUs   Trevor Marshall
  • [gmx-users] GROMACS not scaling well with Core4 Quad technology CPUs   Erik Lindahl
    • [gmx-users] GROMACS not scaling well with Core4 Quad technology CPUs   Trevor Marshall
      • [gmx-users] GROMACS not scaling well with Core4 Quad technology CPUs   Erik Lindahl
  • [gmx-users] GROMACS not scaling well with Core4 Quad technology CPUs   Mark Abraham
    • [gmx-users] GROMACS not scaling well with Core4 Quad technology CPUs   Yang Ye
• [gmx-users] Re: ci barely out of bounds   chris.neale at utoronto.ca
  • [gmx-users] Re: ci barely out of bounds   David van der Spoel
    • [gmx-users] Re: ci barely out of bounds   Matteo Guglielmi
      • [gmx-users] Re: ci barely out of bounds   David van der Spoel
      • [gmx-users] Re: ci barely out of bounds   Matteo Guglielmi
      • [gmx-users] Re: ci barely out of bounds   David van der Spoel
      • [gmx-users] Re: ci barely out of bounds   Matteo Guglielmi
      • [gmx-users] Re: ci barely out of bounds   David van der Spoel
      • [gmx-users] Re: ci barely out of bounds   Matteo Guglielmi
• [gmx-users] searching bugzilla   chris.neale at utoronto.ca
• [gmx-users] Total energy with different energy groups   Daniel Cheong
  • [gmx-users] Total energy with different energy groups   Mark Abraham
    • [gmx-users] Total energy with different energy groups   Daniel Cheong
      • [gmx-users] Total energy with different energy groups   Mark Abraham
      • [gmx-users] Total energy with different energy groups   Daniel Cheong
      • [gmx-users] Total energy with different energy groups   Mark Abraham
      • [gmx-users] Total energy with different energy groups   Daniel Cheong
      • [gmx-users] Total energy with different energy groups   Mark Abraham
      • [gmx-users] Total energy with different energy groups   Maik Goette
• [gmx-users] removing a water molecule   Ragothaman Yennamalli
  • [gmx-users] removing a water molecule   Mark Abraham
    • [gmx-users] removing a water molecule   Ragothaman Yennamalli
      • [gmx-users] removing a water molecule   Mark Abraham
      • [gmx-users] removing a water molecule   Tsjerk Wassenaar
      • [gmx-users] removing a water molecule   Ragothaman Yennamalli
• [gmx-users] calculation of distance , angle ,dihedral   job560 at sohu.com
  • [gmx-users] calculation of distance , angle ,dihedral   Mark Abraham
    • [gmx-users] calculation of distance , angle ,dihedral   Tsjerk Wassenaar
• [gmx-users] BFGS in NMA calculations?   Jones de Andrade
  • [gmx-users] BFGS in NMA calculations?   Mark Abraham
• [gmx-users] simulation popc   mahbubeh zarrabi
• [gmx-users] simulation popc   Yang Ye
  • [gmx-users] simulation popc   mahbubeh zarrabi
• [gmx-users] simulation popc   Yang Ye
  • [gmx-users] simulation popc   mahbubeh zarrabi
    • [gmx-users] simulation popc   Yang Ye
• [gmx-users] Polypeptide interaction   Sheyore Omovie
  • [gmx-users] Polypeptide interaction   Erik Lindahl
• [gmx-users] A question about positiont constraint   yang zaixing
  • [gmx-users] A question about positiont constraint   Mark Abraham
• [gmx-users] Question about DNA simulation   bo yang
• [gmx-users] 1-4 interaction between 160 and 164 at distance 1.573 which is larger than the 1-4 table size 1.000 nm   abhigna polavarapu
• [gmx-users] Question about DNA simulation, To: gmx-users at gromacs.org   Chris Neale
• [gmx-users] Question about DNA simulation   bo yang
• [gmx-users] Question about DNA simulation   bo yang
• [gmx-users] calculation of distance , angle ,dihedral   Alan Dodd
• [gmx-users] Re: ci barely out of bounds   Chris Neale
• [gmx-users] Question about DNA simulation   Chris Neale
• [gmx-users] Question about DNA simulation   bo yang
  • [gmx-users] Question about DNA simulation   Maik Goette
    • [gmx-users] Question about DNA simulation   David van der Spoel
• [gmx-users] [Fwd: genion doubt]   Mark Abraham
  • [gmx-users] [Fwd: genion doubt]   Martin Höfling
• [gmx-users] How to avoid centering of solute by genbox   M.N. Manoj
  • [gmx-users] Genbox problem ...   Kedar Potdar
    • [gmx-users] Genbox problem ...   David van der Spoel
      • [gmx-users] Genbox problem ...   Kedar Potdar
  • [gmx-users] How to avoid centering of solute by genbox   Dallas B. Warren
• [gmx-users] Fatal error: Error: Too many iterations in routine JACOBI   Una Bjarnadottir
  • [gmx-users] Fatal error: Error: Too many iterations in routine JACOBI   Tsjerk Wassenaar
• [gmx-users] QMMM free energy   Robert fiske
  • [gmx-users] QMMM free energy   David Mobley
    • [gmx-users] QMMM free energy   Lars Schaefer
• [gmx-users] finding the minimum energy conformation after a complete mdrum.   Subhrangshu Supakar
  • [gmx-users] finding the minimum energy conformation after a complete mdrum.   Mark Abraham
  • [gmx-users] finding the minimum energy conformation after a complete mdrum.   David van der Spoel
• [gmx-users] segmentation fault   Marius Retegan
• [gmx-users] pdb2gmx error   Alaguraj Veluchamy
  • [gmx-users] pdb2gmx error   David van der Spoel
  • [gmx-users] pdb2gmx error   TJ Piggot
• [gmx-users] Small detail for the gromacs signature ...   Stéphane Téletchéa
• [gmx-users] grompp popc   mahbubeh zarrabi
  • [gmx-users] grompp popc   David van der Spoel
• [gmx-users] Stuck --> unstuck ...   Stéphane Téletchéa
• [gmx-users] about solvate   Rui Li
  • [gmx-users] about solvate   Mark Abraham
• [gmx-users] QMMM free energy   Robert fiske
  • [gmx-users] QMMM free energy   Erik Lindahl
    • [gmx-users] QMMM free energy   Robert fiske
      • [gmx-users] QMMM free energy   David van der Spoel
      • [gmx-users] QMMM free energy   Robert fiske
      • [gmx-users] QMMM free energy   Robert fiske
    • [gmx-users] QMMM free energy   David Mobley
      • [gmx-users] QMMM free energy   David van der Spoel
• [gmx-users] PO4--- Ion Topology   Jason O'Young
• [gmx-users] dihedral .ndx format   Russell Green
  • [gmx-users] dihedral .ndx format   David van der Spoel
• [gmx-users] Question about MD simulation   bo yang
  • [gmx-users] Question about MD simulation   TJ Piggot
• [gmx-users] segmentation fault   Marius Retegan
  • [gmx-users] segmentation fault   David van der Spoel
• [gmx-users] about solvate   Rui Li
  • [gmx-users] about solvate   Mark Abraham
  • [gmx-users] about solvate   Tsjerk Wassenaar
• [gmx-users] RE: Avoid centering in genbox   Dallas B. Warren
  • [gmx-users] RE: Avoid centering in genbox   Tsjerk Wassenaar
• [gmx-users] g_sas and f_index   Mark Abraham
  • [gmx-users] g_sas and f_index   David van der Spoel
    • [gmx-users] g_sas and f_index   Mark Abraham
• [gmx-users] about solvate   Rui Li
  • [gmx-users] about solvate   Tsjerk Wassenaar
  • [gmx-users] about solvate   Mark Abraham
• [Fwd: Re: [gmx-users] QMMM free energy]   Gerrit Groenhof
• [gmx-users] Re: Fatal error: Error: Too many iterations in routine JACOBI   Una Bjarnadottir
  • [gmx-users] Re: Fatal error: Error: Too many iterations in routine JACOBI   Mark Abraham
• [gmx-users] about CNT simulation   bo yang
  • [gmx-users] about CNT simulation   Justin Lemkul

Last message date: Thu May 31 18:47:46 CEST 2007
Archived on: Thu Nov 14 12:03:37 CET 2013

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