[gmx-users] Question on analyzing REMD simulation

[N-J.M. Macaluso]

Hello,

    Thanks for your responses on the demux.pl script. I have some more 
basic questions on how to analyze an REMD simulation in Gromacs.

(1) How can I find the acceptance ratio? (2) Does anyone know how to graph 
the temperature or potential energy of a single replica as a function of 
time?

Thanks!  

Max Macaluso