[gmx-users] CNT-protein interaction

George Abadir georgea at ece.ubc.ca
Fri May 11 03:01:34 CEST 2007

Ok, thank you very much.

Robert Johnson wrote:

> Just take the coordinate files for the protein and the nanotube, cat
> them together and then edit the resulting file. Then you can solvate
> the composite system using genbox.
> Bob
> On 5/10/07, George Abadir <georgea at ece.ubc.ca> wrote:
>> Hi,
>>      I have built a topology file for a protein and a topolgy file for a
>> carbon naontube. I am trying to combine them by solvating the protein in
>> water and inserting the CNT molecule using the -ci option with genbox.
>> However, when I view the resulting file, I can only see the protein in
>> water and the CNT is not there. Can anyone help with that?:)
>>      Thank you vey much in advance,
>> Regards,
>> George
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