[gmx-users] (no subject)

Tsjerk Wassenaar tsjerkw at gmail.com
Tue May 22 15:36:21 CEST 2007

Hi Jee-Young Lee,

In addition to Erik's remark, I think that you can help yourself with
a scan of the archives of this list. The exact same issue has passed
quite recently.


On 5/22/07, Erik Lindahl <lindahl at cbr.su.se> wrote:
> Hi,
> On May 22, 2007, at 1:22 PM, jyoung wrote:
> Editconf and genbox lead some error. ...
> When I run restraints MD, I showd an error message as follows.
> "Check for bad contacts and/or reduce the timestep. ~~~"Unfortunately we
> don't have the slightest chance to help unless you include the full error
> messages and describe your system in detail.
> What type of peptide is it, where did you get it from, what membrane are you
> using, where did you get it from, what are the last 10-20 lines before the
> error message, etc.
> Cheers,
> Erik
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Tsjerk A. Wassenaar, Ph.D.
Junior UD (post-doc)
Biomolecular NMR, Bijvoet Center
Utrecht University
Padualaan 8
3584 CH Utrecht
The Netherlands
P: +31-30-2539931
F: +31-30-2537623

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